Pseudomonas putida DLL-E4, DW66_RS08670
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain DLL-E4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGAAAGCGCGACATCAATACCTGATTTTTTGAGTGCGCGCCAGTGTCCAGATGGCAGCAAAAACCCGGTCACCGCTGAGTAACTGGATTTTTATCGTTAG TAGGGTGTAGACAAAGTCATGTAGTGAGTTGACGCACGAACAGGAGGGCTCGGTCAGGCACATCCACGCCTCGCTCACGGTGCAGATCAACACCCGGGAA CGCGCTCGGGGTGATCACCCGCTCAGCTAGCTACGTGGGCCGTGTCTAGACAGGCGCGGAGACAAACAAGGCTGCAAGAGCGACCGGAGGAGAAATGAAG GCACGGACGATCCCAGTGAGCCTAGGTGACCCCCCCCCCCCCCCCCCCCCTCGAGAATGCTTCGTATTTTCTCAGAAGGTAATAAAAGTACAACTGTCAA CGTGTGAACGGCGTCTTACCGCAACACTCCCGTAGCTTTCCCGTCTAGAATTGCGCCCAGTTACCTTTCCGCGACATTCACTCAAGAAGCGTTCAACCCT
|
|
| DNA Sequence for Gene |
>DW66_RS08670
ATGACAATCCTGGTAACCGGCGGCGCCGGCTTCATCGGTGCGAATTTCGTGCTGGATTGGTTAAGCCAGTCAGGCGAAACCATCGTCAACCTGGACAAAC TGACCTACGCCGGGAACCTGCGGAGCCTGGTTAGCCTGGAAGGTAATCCGCAACATGTCTTCGTGCATGGGGATATCGGTGATGGGCCGTTGGTGCAACG GCTGTTGTCCGAGCACAACCCGCGCGCCGTGCTCAATTTCGCCGCCGAGTCGCATGTCGACCGCTCCATTCACGGGCCCCAGGCATTCGTAGAAACCAAT GTGGTGGGTACCTTCCAGTTGCTGGAAGCAGTGCGGGGCTACTGGCAGTGCCTGGACGAGGCAGAGCGGGCGGTGTTCCGCTTCCTGCATGTTTCCACCG ACGAGGTGTATGGCTCGTTGAAAGCTGGTGAGCCTGCGTTCACCGAGACCCATCAATACCAGCCAAACAGCCCGTACTCGGCCAGCAAGGCGGCTAGCGA CCACTTGGTGCGTTCCTATCACCACACCTATGGCCTGCCGGTGCTCACCACCAATTGCTCGAACAACTACGGGCCGCTGCATTTCCCCGAGAAGCTGATC CCGCTGATGATCGTCAATGCCTTGGCTGGCAAGCCGCTGCCGGTGTATGGCGATGGGCAGCAGATTCGCGACTGGCTATACGTCAAAGACCACTGCAGCG CCATCCGCCGTGTGCTGGAAGCAGGGCAGGTGGGTGAGGTGTACAACGTCGGCGGCTGGAACGAAATGCCCAACCTCGACATCGTCCACCGCGTATGTGC GCTGCTCGATGAACTTCGCCCGCGGGTTGACGGGCAGCCTTATGCCAGCCAGATCAGCTTCGTCACCGACCGCCCAGGCCACGACCGCCGTTATGCAATC GATGCCCGCAAGCTCGAGCGCGAGCTTGGCTGGAAGCCTGCCGAAACATTCGAAACCGGGATTCGCAAGACGGTTACCTGGTATCTGGCTAACCAGGACT GGGTCAAAGGCGTAATGGACGGCAGCTATCGTGACTGGGTCGCACAGCAATATGGGGCTAACAAAGTTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AAATCTTGCTGTTGGGGAAGAACGGACAGGTAGGTTGGGAGCTGCAGCGTGCCCTCGCGCCATTGGGGGAGGTGATTGCGCTTGACCGCCAGGGCGACGG TAGCTTGTGTGGGGATCTGAGTGACCTCGAAGGCCTGGCGGCTACAGTGCGCTCGCTAGCCCCGGATGTGATCGTCAACGCTGCCGCCTACACGGCAGTG GACAAAGCCGAGAGCGAGCCAGAGCTGGCTGCCCGGATCAATGCCGAAGCGCCGGATGTTCTGGCATGCGAGGCCGCCAAGCTGGGCGCATGGCTGATCC ACTACTCCACAGACTACGTGTTCGATGGCGCTGGCCAGGCGCCGTGGCAAGAGGATGCCCCCACCGGCCCCTTGTCCGTCTATGGCCGTACCAAGCTCGA TGGTGAGCTGGCCATTCAGGCCAGCGGTGCTTCTGCCGTGGTGCTGCGTACCAGCTGGGTGTATGCTGCGCGCGGCCACAATTTTGCCAAGACCATGCTG
|
|
| Amino Acid Sequence |
>spore coat protein
MTILVTGGAGFIGANFVLDWLSQSGETIVNLDKLTYAGNLRSLVSLEGNPQHVFVHGDIGDGPLVQRLLSEHNPRAVLNFAAESHVDRSIHGPQAFVETN VVGTFQLLEAVRGYWQCLDEAERAVFRFLHVSTDEVYGSLKAGEPAFTETHQYQPNSPYSASKAASDHLVRSYHHTYGLPVLTTNCSNNYGPLHFPEKLI PLMIVNALAGKPLPVYGDGQQIRDWLYVKDHCSAIRRVLEAGQVGEVYNVGGWNEMPNLDIVHRVCALLDELRPRVDGQPYASQISFVTDRPGHDRRYAI DARKLERELGWKPAETFETGIRKTVTWYLANQDWVKGVMDGSYRDWVAQQYGANKV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|