Pseudomonas putida DLL-E4, DW66_RS08665
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain DLL-E4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TACGGGCCGCTGCATTTCCCCGAGAAGCTGATCCCGCTGATGATCGTCAATGCCTTGGCTGGCAAGCCGCTGCCGGTGTATGGCGATGGGCAGCAGATTC GCGACTGGCTATACGTCAAAGACCACTGCAGCGCCATCCGCCGTGTGCTGGAAGCAGGGCAGGTGGGTGAGGTGTACAACGTCGGCGGCTGGAACGAAAT GCCCAACCTCGACATCGTCCACCGCGTATGTGCGCTGCTCGATGAACTTCGCCCGCGGGTTGACGGGCAGCCTTATGCCAGCCAGATCAGCTTCGTCACC GACCGCCCAGGCCACGACCGCCGTTATGCAATCGATGCCCGCAAGCTCGAGCGCGAGCTTGGCTGGAAGCCTGCCGAAACATTCGAAACCGGGATTCGCA AGACGGTTACCTGGTATCTGGCTAACCAGGACTGGGTCAAAGGCGTAATGGACGGCAGCTATCGTGACTGGGTCGCACAGCAATATGGGGCTAACAAAGT
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| DNA Sequence for Gene |
>DW66_RS08665
TTGAAAATCTTGCTGTTGGGGAAGAACGGACAGGTAGGTTGGGAGCTGCAGCGTGCCCTCGCGCCATTGGGGGAGGTGATTGCGCTTGACCGCCAGGGCG ACGGTAGCTTGTGTGGGGATCTGAGTGACCTCGAAGGCCTGGCGGCTACAGTGCGCTCGCTAGCCCCGGATGTGATCGTCAACGCTGCCGCCTACACGGC AGTGGACAAAGCCGAGAGCGAGCCAGAGCTGGCTGCCCGGATCAATGCCGAAGCGCCGGATGTTCTGGCATGCGAGGCCGCCAAGCTGGGCGCATGGCTG ATCCACTACTCCACAGACTACGTGTTCGATGGCGCTGGCCAGGCGCCGTGGCAAGAGGATGCCCCCACCGGCCCCTTGTCCGTCTATGGCCGTACCAAGC TCGATGGTGAGCTGGCCATTCAGGCCAGCGGTGCTTCTGCCGTGGTGCTGCGTACCAGCTGGGTGTATGCTGCGCGCGGCCACAATTTTGCCAAGACCAT GCTGCGTCTGGCGGCGGAGCGCGATGCGCTCAACGTGGTGGCAGACCAGTTTGGCGCCCCCACCGGCGCAGACCTGATCGCCGATGTTACCGCCCATATC CTGCACCGAATATTCGGCGTGCAGGACGCGCGCCATTTGGCAGGCACCTACCATCTTGCTGCAGCCGGCGAAACCAGCTGGCACGGGTATGCCCAGTTCG TATTGGCACAAGCCAGCCGCAATGGCGTTGCCTTGAAGGTTTCAGCTGAACGGGTAGGCGCAATCAGTACCGAAGCCTACCCGGCGCCGGCGCCACGCCC GCGAAATTCCCGGCTGGCATTGGCTAAACTCGAAGAAACCTTCAATCTCAAGATGCCGCTTTGGCAACAAGGTGTGCAACGCATGCTGGACGAAATCCAG CGCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGTTGTTATGGCACGTAAAGGACTCATTCTTGCGGGCGGCTCTGGCACTCGCTTGCACCCCGCCACGCTGTCGGTATCGAAGCAGCTGTTGCCGGTGTA CGACAAGCCGATGATCTACTACCCGCTCAGTACACTGCTGCTGTCCGGCATTCGTGACATCCTGATCATCTCGACGCCACAGGACACCCCGCGCTTCGAG CAACTGCTGGGTGATGGTAGCCGTTGGGGCATCAACCTCTCGTATGCTGTGCAGGCTAACCCGGACGGGTTGGCCCAGGCATTCACGATCGGGGCAGACT TCATTGGCAACGCCGTGTCCGCTTTGGTGCTGGGTGACAATATTTTCTATGGTCACGACTTCCAGGCGCTGCTACAGAGCGCTGACCAGCGGCAGACGGG GGCGTCCGTCTTTACTTATCATGTCCAGGACCCGGAGCGTTATGGGGTCGCGGAGTTCGATGACAGCGGGCGTGTGCTGTCGATTGAAGAAAAGCCGAAG
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| Amino Acid Sequence |
>dTDP-4-dehydrorhamnose reductase
MKILLLGKNGQVGWELQRALAPLGEVIALDRQGDGSLCGDLSDLEGLAATVRSLAPDVIVNAAAYTAVDKAESEPELAARINAEAPDVLACEAAKLGAWL IHYSTDYVFDGAGQAPWQEDAPTGPLSVYGRTKLDGELAIQASGASAVVLRTSWVYAARGHNFAKTMLRLAAERDALNVVADQFGAPTGADLIADVTAHI LHRIFGVQDARHLAGTYHLAAAGETSWHGYAQFVLAQASRNGVALKVSAERVGAISTEAYPAPAPRPRNSRLALAKLEETFNLKMPLWQQGVQRMLDEIQ R
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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