Pseudomonas putida DLL-E4, DW66_RS05300
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain DLL-E4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTCGCTGGGCAAGCAGCCAAAGGGTGCCAAGGAGCGCGAAGGCGACAAGAAAACCCCCGAGGGCCTTTACTGGCTGGACTGGCGTAAGCAAAGCGACCGT TTCAACCTGGCCATACACATCAACTACCCGAACATCAACGACGCGGCCCGTGCCACTCGTGAAGGGGTGAGTGCCGGCAGCATGATCATGATCCATGGCA CGCCGATCAACGACGAGTATCCGGAGTGGTACTTCCACACCCTGGACTGGACGGATGGGTGTATTGCCATGCGTAACCGCGACATGCAGGAAGTTTGGGA CCTGGTGCGGGATGGCACGTTGATCGAAATTCGGCCCTGATAGCGGGCCTTTCAACTGATGCTGTAGGAAGCTTCCCACCATCAGGCAAGAACGCGCCCT ACAAGCGCTTAGGCCGGGTACTGCATCCAGGCGAACCCCTTAATTTTTAGCATCCACGCAGACGAGTACGAAATCCGTACATCATTTGCGGGGTGCTTCA
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| DNA Sequence for Gene |
>DW66_RS05300
ATGCCGTTCCACATTCATCGCGCCACCTGCTGGGCGCTCACCTGCTGCCTGTCAGGTTTGCTGGCCGCACCACAGGCGTTGGCCGACGACCCGGCCAGCC AGCAACTGCGCGATCAGCAGCGTGGGCTGCAACAGCTGGAACAGCAACAGCGGCTGGAACGCTGGCAGCGCCAGCCCGCCCCGGCTGAAAGCCACGACAC CACCGCCCCCCTCCCGCACGACCAGCGCTGCTGGGCCATCACCGGCGTACGCGTGGCCGGCAACCGCGAGCTTTCCGACTCGGCGCTAACGCCAACCCTC CGCAGGTTCATTACCCCGTGCATGGGTATCGCGGAAATCAACGGGCTGCTGAAAGCCATCACCCAGCGCTATGTGCAAGCCGGATACCCGACCAGCCGGC CCTACCTGCAGCAACCTCCACAAAACGGCGCACCGCTGAATCTGGTCATCGTCGAGGGGTTCGTCGAGTCCATCGAAATGGCCGGCCCCGAGTTGCCCCT GTCGCTCCCCGGCGCGTTTCCCGGCCTGCTCGGGCAGCCACTGTTCCTGCCAGCCCTGGAGCAAGGCCTCGACCAGCTCAACCGGCTGCGCGCTTATGAC CTGTCCGCAGAGTTGCTGCCCGGCGAACTGCAGGGCGGCACCCGGGTTGTCGTGCAGCCGCGCAAGGTGGCCTCGCGCGGGCACTTGGACAGCCGCTTCG ACAACCGCGGCAGCGACCTGACCGGGCGTCATCGCCTGAACTTAGGCTTCGGCCTGGACAGCCCGCTGGGCCTCAATGATGACCTGCGCCTGTCGCTGTA CGGCACGGTGCTTGATGCGCCCGGGCAAAGCCAAGGCATCTCGCTGTACTACAGCATCCCCTACGGCGCCTGGACCTTCGCGCTCAGCGCCAGCGAGCTG CGCTACGAGGCGCCGCTCCCCCACAGCCGCCAGGTAGCCGACGGCAGCAGCAGCAGCAGCTACCAGGGCCTGAGCGTCGAGCGGGTGCTGTGGCGCAACC AGCAAGGCATGCTCAGCGCCAGCGCCCGGCTGGACCGCAAGCAGATGGTCAACCGCAGCGCGGGCGCGGTGATCGTCCAGCAGAGCCCCACCCTGGTCTC CTTGGAAGCGGGTATCAACCTGCTGTGGCTCCAGGGCGGCCTGTGGAATGGCTACCTCGGTGTCGCCCAGGGCGTCGATGCCTTCGGCGCCGACCGCTCA CCGCTGGGAGCGGAACGCCTGCGCCCGGATTTTCGCAAGTACCGCGCCAACCTGCTGCACCTGCGCCAGGGCCCGGCCAGCCACCCATGGCGCTGGCAGA GCGAACTGGCTCTGCAATACAGCAGTGACCCGCTACCCGCCGTCGAGCAGTTGCTGGCCAGCGACGATTCGGCCGTGCGCGGGTTTCGCCTGCGTACCTA CTCCGGCGCCAGCAGCGCCGTCTGGCGCAACACCGTCAGTCAGCCGCTGCCGGAGCGCTGGACGGCTCCCCTGCAGGTACGCCCCTACATCGGCCTGGAC CTGGGCTGGACCCGCACTGCCGAAGGCAAGCCTTCACAACGCCTCGCCGGGGCCACTGCCGGTGCCGAACTGAGCCTGCCCGGCAGCCACCTGCGCCTGG GCTACCAACGGGCACTGTACGCCAGCGACTCGCCCCGCCCGCTGCTGGAACCCGGTTTCTGGGTAGTGGAACTGGCCCTGACCATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCACCCACAACAAAGAGAACGAGAACATGCAAACACTCTCGCAGTCACCGTATTCCCGCCCGGATATCTTGCGCTGGGCCATCTTCCTCGGCCTGCTCG GGCCCGGCGCCGCACTGGCCCAGGGCGGCCTGGCAGCAACCAGCGGCCCCGGTGGTACACCGGTCATCAACGACGGCCACGGCGTCCCGGTCATCGATAT TGTCGCGCCAAACGCCAACGGGCTGTCGCACAACCAGTTCCTCGACTACAACGTCGACCGTTCAGGATTGGTGCTGAACAATGCCACCCAGGCCGGGCAG TCGGAACTGGCCGGTGCCCTGGCGGCCAACCCGCAATTCCAGGGCCAGGCCGCCTCGACCATCCTCAACGAGGTGGTCAGCCGCAACGCCTCGCTGATCG AAGGGCCACAGGAAATCTTCGGCCGCCCGGCCGACTACATACTGGCCAACCCCAATGGCATCACCCTCAACGGCGGCAGTTTCATCAACACCACACGCGC
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| Amino Acid Sequence |
>TPS family activation/secretion protein
MPFHIHRATCWALTCCLSGLLAAPQALADDPASQQLRDQQRGLQQLEQQQRLERWQRQPAPAESHDTTAPLPHDQRCWAITGVRVAGNRELSDSALTPTL RRFITPCMGIAEINGLLKAITQRYVQAGYPTSRPYLQQPPQNGAPLNLVIVEGFVESIEMAGPELPLSLPGAFPGLLGQPLFLPALEQGLDQLNRLRAYD LSAELLPGELQGGTRVVVQPRKVASRGHLDSRFDNRGSDLTGRHRLNLGFGLDSPLGLNDDLRLSLYGTVLDAPGQSQGISLYYSIPYGAWTFALSASEL RYEAPLPHSRQVADGSSSSSYQGLSVERVLWRNQQGMLSASARLDRKQMVNRSAGAVIVQQSPTLVSLEAGINLLWLQGGLWNGYLGVAQGVDAFGADRS PLGAERLRPDFRKYRANLLHLRQGPASHPWRWQSELALQYSSDPLPAVEQLLASDDSAVRGFRLRTYSGASSAVWRNTVSQPLPERWTAPLQVRPYIGLD LGWTRTAEGKPSQRLAGATAGAELSLPGSHLRLGYQRALYASDSPRPLLEPGFWVVELALTI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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