Pseudomonas putida DLL-E4, DW66_RS01055
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain DLL-E4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGACCGCAGCTGTCGCCAAGGAAGAGACCTTCGGCCCACTGGCGCCGCTGTTCCGCTTCAAGGACGAAGCCGAAGTCATCGCCATGTCCAACGACACCGA GTTCGGCCTGGCCTCGTACTTCTACGCCCGCGACATGAGCCGTGTGTTCCGTGTTGCCGAAGCCCTGGAATACGGCATGGTGGGTATCAACACCGGCCTG ATCTCCAACGAAGTGGCACCTTTCGGCGGCATCAAGGCTTCGGGCCTGGGCCGTGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACC TGTGCATCAGCGTCTGATCGCACGGTAACGGCTTTACCTCTGCCAGCGGGGCGCGAGAGCGACGTCTCGCTGGCCTTTTTGACATCGCAGTACCTGGTGG CCAGGGCGTTCACGGCAGTCGATCAACGAATACTGTTCGCGGGCTCACCCAGCCACCCCCGAATAAAAGCGCCACTCCAAACCGGCGCAATGAGGGCATT
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| DNA Sequence for Gene |
>DW66_RS01055
ATGAGCAAGACCAACGAATCCTTGATGCAACGTCGTGTAGCTGCCGTCCCACGTGGCGTTGGCCAGATCCACCCGATCTTCGTCGACACCGCGAAGAACT CGACCGTGATCGACGTTGAAGGCCGCGAACTGATCGACTTCGCCGGCGGCATCGCAGTACTGAACACCGGCCACCTGCACCCGAAAGTGGTTGCGGCCGT GCAAGATCAGCTGACCAAGGTCAGCCACACCTGCTTCCAGGTGCTGGCCTACGAACCCTATGTAGAGCTGTGCGAAAAGATCAACAAGCTGGTACCAGGC GACTTCGACAAGAAGACCCTGCTGGTCACCACCGGCTCCGAAGCCGTTGAAAACGCCGTCAAGATCGCCCGTGCCGCCACTGGCCGTGCTGGCGTCATCG CCTTCACCGGCGGCTACCACGGCCGTACCATGATGACCCTGGGCCTGACCGGCAAGGTCGTACCGTACTCCGCTGGCATGGGCCTGATGCCAGGCGGCAT CTTCCGCGCCCTGTTCCCGAGCGAACTGCACGGTATCAGCGTTGACGACGCCATCGCCTCGGTCGAGCGCATCTTCAAGAACGACGCCGAGCCGCGCGAT ATCGCCGCGATCATCCTCGAGCCGGTACAAGGCGAAGGCGGCTTCCTGCCAGCGCCGAAAGAGCTGATGCAGCGCCTGCGCGCCCTGTGCGACCAGCACG GCATCCTGCTGATCGCCGACGAAGTGCAGACTGGCGCTGGCCGTACCGGCACCTTCTTCGCCATGGAGCAGATGGGCGTTGCGCCTGACCTGACCACCTT CGCCAAGTCCATCGCTGGCGGCTTCCCGCTGGCCGGTGTGTGCGGCAAGGCCGAGTACATGGACGCCATCGCCCCGGGCGGCCTGGGCGGTACCTACGCC GGTTCGCCGATCGCTTGCGCCGCGGCCCTGGCCGTGATCGAAGTGTTCGAAGAAGAAAAACTGCTGGACCGCAGCAAGGCTGTGGGTGAGCGCCTGACCA CTGGCCTGCGCGAAATCCAGAAGAAGCACCCGATCATCGGCGACGTCCGTGGTCTGGGCTCGATGATTGCCGTCGAAGTGTTCGAGAAAGGCACTCACAC CCCGAACGCTGCTGCTGTTGGCCAGGTTGTGGCCAAGGCACGTGAGAAGGGTCTGATCCTGCTGTCTTGCGGCACCTACGGCAACGTCCTGCGTATCCTG GTTCCGCTGACCGCCGAAGACGCACTGCTGGACAAAGGCCTGGCCATCATCGAAGAGTGCTTCGCCGAACTGGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGCTGATTCGCCCCAGTAAGAAAACCGCCCGGGCAATGCCCGGGCGGTTTTTTTTCGCCTGGTGTTCAGGTGTCGGAGGATGCCCAGACTGCGCTTGGG AAGAAGCGCTCGACCAAGTCGTCGTTTTTCAGCATCGCGGCATACTCGTCGCGCTTGAAGGGGTTGCCTGTGCGCAGGTCGAATACGGGGTGTTCCACAG GAACCTCGTCTGGGACTTCCTTGAGCTTCACATTGACGAAACGGAAATCGTCACCAACCACTTCGCCGATGTCATCGATCTGGAAGCGGCATCCCGGTGG GAACAGTGTTTCCGCTTCTGTGCTGGACCATGACAGCGGCGCAATGGGGGCGCCGCTGTGGTACTGACCGGCAGGCAGCTCAAAGACCACCGATGTATTG TCGAAACTGCCCGTTATGTTGTCCGCCGATGCGAGCTTATCGGTGGCGAAATCGCGTACGACGTAAGGGTTTTCCGTAAAGGAAGCCAGGTCCGAGTTGA
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| Amino Acid Sequence |
>4-aminobutyrate aminotransferase
MSKTNESLMQRRVAAVPRGVGQIHPIFVDTAKNSTVIDVEGRELIDFAGGIAVLNTGHLHPKVVAAVQDQLTKVSHTCFQVLAYEPYVELCEKINKLVPG DFDKKTLLVTTGSEAVENAVKIARAATGRAGVIAFTGGYHGRTMMTLGLTGKVVPYSAGMGLMPGGIFRALFPSELHGISVDDAIASVERIFKNDAEPRD IAAIILEPVQGEGGFLPAPKELMQRLRALCDQHGILLIADEVQTGAGRTGTFFAMEQMGVAPDLTTFAKSIAGGFPLAGVCGKAEYMDAIAPGGLGGTYA GSPIACAAALAVIEVFEEEKLLDRSKAVGERLTTGLREIQKKHPIIGDVRGLGSMIAVEVFEKGTHTPNAAAVGQVVAKAREKGLILLSCGTYGNVLRIL VPLTAEDALLDKGLAIIEECFAELA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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