Pseudomonas plecoglossicida NyZ12, RK21_RS28350

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas plecoglossicida strain NyZ12, complete genome. [Details]
DNA Sequence Upstream of Gene
GGCATTGTCATCGACCGCCGCCTGCCGGTGCTGCTTACCCCTTGAGCCAGATGCCCTGGCTGTCCTCGTGGCAGCTCAGGGCCTGCAGTTGCTCGCCCTC GCACGGCCCGGCCACGCATTCTCCACTTTCGATCAGAAACAGCGCGCCATGATGGGCGCAGTGAATCAGGCTGGCGCTGTCATCGAGAAACGCATCTTCT ACCCAGTTCAGCGGGATGCCGCGGTGCGGGCAACGGTTGCGGTAGAGGTACACCTGGCCCTGGCGGCGTACGCCGAACAGTTCGATGCCGTCTACGCTGA AGGCGCGGCTTTGGCCTTCGGCCAGGCCGTGGGAGGTACAAAGGAAGTGCATGGCAAAGACGACTCGTGGAACAAGTGATGGCTTGACGCTTCAATGCGA ATAATTATCAAATTGTCCATATTCGCTGCGCCCGGCTGCCTATGGTGCGCAGTTCCGTCGCTCGCCACAAGGCGCGCGGCTCGCCTGCAGAAGGAACCCG
DNA Sequence for Gene
>RK21_RS28350
ATGATGCGCCGTCCTGTCGCCTTGCTCGCTCTGTGCGCGAGCGTTGTGCTGTCCACCCAGGCCCTGGCGGCCGAGCTGCCGCAGCGTTGGGTCAGCGCTG GTGGCGCACTGAGCGAATGGATCAGCGCACTTGGCGGTGAAGCGCGCTTGGTGGGTGTGGACACCACCAGCCAGCACCCGCAATCGCTGAAGTCACTGCC TAGCGTCGGCTACCAGCGGCAGTTGTCTGCGGAAGGCATTCTCAGCCTGCGCCCGGATGTGCTGGTGGGCACCGAAGAAATGGGGCCGCCACCGGTACTG GCGCAAATCCGCAAGGCTGGCGTGCGGGTCGAACTGTTCTCCAGCAAAGCCGAGGTGGCGGCGGTGGATGAAAACCTCAAGCATCTGGGGCAATTGCTGG GCGCAGAAGAGCAGGCCGCGGTCTTGGCGTCGGGTTACCACCAGCAGCTCGATGCCTTGCAGGCCAGGGTCAGGCAGGCCCAGGCCGGGCAGAAGGCGCC AGGAGTGTTGCTGCTGGTCGGGCATGCGGGTGCCAAGCCGCTGATCGCCGGGCAGGGTACCGCTGGCGACTGGCTGCTGAGCCAGGCAGGCGGGCGCAAC TTGGCAGAACATCAGGGCTACAAGAATTCCTCCAGCGAAGCACTGGCTGCGCTGGACCCGGATGTGATCGTGTTTTCCGACCGGGCGCTGGCCGATGACC AAGCCTTGAAGGCGTTGCTGAAAGAAAACCCCGCGCTGGCGACCTCGCGCGCCGTGCGAGAGAAACGCCTGGTATCGCTTGACCCGACACTATTGGTCGG CGGGCTCGGGCCACGCCTGCCGGCAACACTTCAGTTGCTTGCGGCTACCTTCTATCCGGCCGCCAAGATCAGCCTCTACCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACAACGGGTCCAGCCACGCACACTGTTCGTTTGCCTGGGCCTGTTGTGCCTGTTGGCGGTGTGGTTGTCTTTGGCCTTGGGGCCGGTCAGCCTGCCGTT GTTCGATACCCTGCGTGCCGGCTTGCGCTTGCTGGGGTTACCCATTGCCGCTGACGGCCTGCAGCAGGCCGAGATGATCCTCGGCCAGATCCGCCTGCCG CGCACCTTGCTGGGATTGGCGGTGGGCGCGGTGCTGGCGCTGTCTGGTGTGGCCATGCAGGGGCTGTTCCGTAACCCTCTGGCCGACCCCGGGCTGGTAG GGGTTGCCGCCGGAGCAGCGGTGGGCGCGGCGGTGGCCATCGTTGGCGGCAGTTGGCTGGGCGGCATGCCGGATGTGCTTGCCCCCTACCTGTTGTCGCT GTGCGCTTTCATCGGCGGGCTGGGCGTGACTGCGCTGGTTTATCGTCTGGGGCGACGCGACGGCCAGACCAACGTCGCCACGATGCTGCTGGCCGGTGTG
Amino Acid Sequence
>ABC transporter substrate-binding protein
MMRRPVALLALCASVVLSTQALAAELPQRWVSAGGALSEWISALGGEARLVGVDTTSQHPQSLKSLPSVGYQRQLSAEGILSLRPDVLVGTEEMGPPPVL AQIRKAGVRVELFSSKAEVAAVDENLKHLGQLLGAEEQAAVLASGYHQQLDALQARVRQAQAGQKAPGVLLLVGHAGAKPLIAGQGTAGDWLLSQAGGRN LAEHQGYKNSSSEALAALDPDVIVFSDRALADDQALKALLKENPALATSRAVREKRLVSLDPTLLVGGLGPRLPATLQLLAATFYPAAKISLYQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site