Pseudomonas plecoglossicida NyZ12, RK21_RS28250

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas plecoglossicida strain NyZ12, complete genome. [Details]
DNA Sequence Upstream of Gene
AAAAGCTCAGATCGTTGCCGAATACCAGCAAGCCGCCGGCGATACCGGTAGCCCGGAAGTGCAGGTTGCTCTGCTGACCGCCAACATCAACAAGCTGCAA GGCCACTTCAAGGCCAACGATAAAGACCACCACTCCCGTCGTGGTCTGATCCGTATGGTCAACCAGCGTCGTAAGCTGCTGGACTACCTGAAGGGCAAAG ACACCACTCGTTACAGCGCCCTGATCGGTCGCCTGGGTCTGCGTCGCTAATAGCGGCCTGGCCAGTGGTGTGCATGGCGTGTCGCAGGCTTCGGCAGGGC TGTTTTGCAGTGCTGCCGTTGGACACGCCACGCGTATCTCCGAGGTTGGCAGCCTGGCAATGCTGAGCGGATTTTCCGCTTGGTGCCAGGCTCCCAGCCT CGTGTTGTATCTGGACGGTCAATGGGGCCGATTCCCCGTTCTGCCCAAGAATTCGCAAGAAACCAGTTCCCCCAGAGCCACTGAAAAAAGGTAGGAAACC
DNA Sequence for Gene
>RK21_RS28250
GTGAACCCGGTAATCAAGACATTCCAGTTCGGTCAGTCGACCGTTACTCTCGAAACGGGCCGTATTGCCCGTCAGGCAACCGGCGCCGTGCTGGTTACCG TCGACAACGACGTCACCGTGCTGGTGACCGTGGTCGGTGCCAAACAGGCCGATCCAGGCAAGGGCTTCTTCCCGCTGTCGGTCCACTACCAGGAAAAGAC CTACGCCGCCGGCAAGATCCCGGGTGGCTTCTTCAAGCGTGAAGGCCGTCCTTCCGAGAAAGAGACCCTGACCTCGCGCCTGATCGACCGTCCGATCCGT CCGCTGTTCCCGGAAGGCTTCATGAACGAAGTGCAGGTTGTCTGCACCGTGGTTTCCACCAGCAAGAAGACCGACCCGGACATCGCTGCGATGATCGGTA CCTCGGCCGCCCTGGCCATCTCCGGCATTCCTTTCGAAGGCCCGATCGGCGCCGCTCGCGTTGCCTTCCACGAAAGCACCGGCTACCTGCTGAACCCGAC CTACGAGCAACTGGCTGCCTCGAGCCTGGACATGGTCGTTGCCGGTACCGAATCGGCTGTACTGATGGTTGAGTCGGAAGCCAAAGAGCTGACCGAAGAC CAGATGCTGGGCGCCGTGCTGTTCGCCCACGACGAATTCCAGGCCGTGATCCAGGCCGTCAAGGAACTGGCTGCCGAAGCCGGCAAGCCGACCTGGGACT GGCAGCCAGCCCCGGCCAACGTCGAGCTGATGAACCTGGTACGCGCCGAGTTCGGCGAAGCCGTTTCGCAGGCCTACACCATCACCCAGAAGGCTGACCG CTACAATCGCCTGGGCCAGCTGCGCGACGAGGCTGTTGCCCGTCTGAGCAACGAAGAGACCGGCCCGTCCGCCGGCGCCATCAAGGAAATCTTCGGCGAG CTGGAATACCGCACCGTCCGTGAGAACATCGTCAACGGCAAACCGCGTATCGACGGCCGTGACACCCGCACCGTGCGCCCGCTGAACATCGAAGTCGGCG TCTTGCCAAAGACTCACGGTTCGGCGCTGTTCACCCGTGGCGAAACCCAGGCCCTGGTCGTTGCGACCCTGGGTACTGCCCGTGACGCCCAGCTGCTGGA CACCCTGGAAGGCGAGAAAAAAGACCCGTTCATGCTGCACTACAACTTCCCGCCATTCTCGGTGGGTGAGTGCGGTCGCATGGGCGGCGCTGGCCGTCGT GAAATCGGCCACGGCCGCCTGGCCCGTCGTGGCGTGCAGGCCATGCTGCCGAGCGACAGCGAGTTCCCGTACACCATCCGCGTGGTATCGGAAATCACCG AATCCAATGGTTCCAGCTCCATGGCTTCGGTCTGTGGTGCTTCCCTGGCCCTGATGGACGCTGGTGTACCGATGAAGGCACCGGTTGCCGGTATCGCCAT GGGCCTGGTCAAGGAAGGTGACAAGTTCGCCGTCCTGACCGACATCCTGGGTGACGAAGACCACCTGGGCGACATGGACTTCAAGGTAGCCGGTACCGCC AAGGGTGTTACCGCGCTGCAGATGGACATCAAGATCAACGGTATCACCGAAGAGATCATGGAGATCGCCCTGGGCCAGGCCCTGGAAGCGCGCCTGAATA TCCTCGGCCAGATGAACCAGATCATCGCCCAGTCGCGTAGCGAGCTGTCGGCCAACGCCCCGACCATGATCGCGATGAAGATCGACACCGACAAGATCCG TGACGTCATCGGTAAAGGCGGCGCCACCATTCGCGCCATCTGCGAAGAGACCAAGGCTTCGATCGACATCGAAGACGATGGCTCGATCAAGATCTTCGGC GAAACCAAGGAAGCGGCAGATGCTGCCAAGCAACGCATCCTGGGCATTACCGCCGAAGCCGAGATCGGCAAGATCTACGTCGGCAAGGTCGAGCGCATCG TCGACTTCGGTGCGTTCGTAAACATCCTGCCTGGCAAGGACGGCCTGGTGCACATCTCCATGCTGAGCGATGCTCGCGTCGAGAAAGTCACCGACATCCT GAAAGAAGGCCAGGAAGTCGAAGTACTGGTACTGGACGTGGATAACCGCGGCCGTATCAAGCTGTCGATCAAGGACGTTGCCGCGGCGAAGGCCTCGGGC GTCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGACCGCCACGCAACAGGAAAAGGGCCCTTCGGGGCCCTTTTTTCATGGGCGAAAGGGAACCTTTTGCGGACTTGCATCTTGCATGCAGGTTTACCGTG CAGATTGCAAAATGCACGACGACGGGAATGCTGGTTTTTCGCTAACTTATTGATTTGAAAGGAAACAAGCGAGACGGAAAAGCTGGCACAGCGCATGCAA CTACCTCCATATCTGACGCCAGGACATACGGCGCAGACCTTTCGAAAAACAGGAGTGACTCACATGAAGAAGTTCGCCATTGCTGCCGCTACTGCTACCG CCCTGACCCTGACCATGGCTAACGGCGCATTCGCTGCGGAGCCAACCCAGGCTCCAGTCATGTTGGCTGCCAACACCGTGGATAACGCCAAGCAGGAAGG TTCCGACACCTGGATCACTACCAAGGTGAAAGCGGACCTGCTGACTGAAAAAGGTATTCCAGGCAGCGACATCAAAGTCGAGACCAGCCAAGGCGTCGTC
Amino Acid Sequence
>polynucleotide phosphorylase/polyadenylase
MNPVIKTFQFGQSTVTLETGRIARQATGAVLVTVDNDVTVLVTVVGAKQADPGKGFFPLSVHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIR PLFPEGFMNEVQVVCTVVSTSKKTDPDIAAMIGTSAALAISGIPFEGPIGAARVAFHESTGYLLNPTYEQLAASSLDMVVAGTESAVLMVESEAKELTED QMLGAVLFAHDEFQAVIQAVKELAAEAGKPTWDWQPAPANVELMNLVRAEFGEAVSQAYTITQKADRYNRLGQLRDEAVARLSNEETGPSAGAIKEIFGE LEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTARDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRR EIGHGRLARRGVQAMLPSDSEFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGDKFAVLTDILGDEDHLGDMDFKVAGTA KGVTALQMDIKINGITEEIMEIALGQALEARLNILGQMNQIIAQSRSELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG ETKEAADAAKQRILGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARVEKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASG V
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site