Pseudomonas plecoglossicida NyZ12, RK21_RS19865

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01427
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01427
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022877 protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00829
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01427
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005351 carbohydrate:proton symporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01427
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppj00051 Fructose and mannose metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppj01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppj01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppj02060 Phosphotransferase system (PTS) 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02378 Phosphotransferase system, EIIC IPR003352 Phosphotransferase system, EIIC 246 509 2.8E-16
Gene3D G3DSA:3.40.50.2300 - - - 111 218 1.6E-38
FunFam G3DSA:3.40.50.2300:FF:000014 PTS system fructose-like transporter subunit IIB - - 115 220 6.5E-36
CDD cd05569 PTS_IIB_fructose IPR003353 Phosphotransferase system, fructose-specific IIB subunit 3 98 3.09333E-28
NCBIfam TIGR01427 JCVI: fructose-specific PTS transporter subunit EIIC IPR006327 Phosphotransferase system, fructose IIC component 229 565 0.0
SUPERFAMILY SSF52794 PTS system IIB component-like IPR036095 PTS system IIB component-like superfamily 119 218 1.41E-35
Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IPR003501 Phosphotransferase system, EIIB component, type 2/3 122 203 2.2E-18
CDD cd05569 PTS_IIB_fructose IPR003353 Phosphotransferase system, fructose-specific IIB subunit 120 215 2.77423E-24
Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IPR003501 Phosphotransferase system, EIIB component, type 2/3 5 88 8.9E-10
Gene3D G3DSA:3.40.50.2300 - - - 1 101 5.6E-23
PANTHER PTHR30505 FRUCTOSE-LIKE PERMEASE - - 115 570 0.0
NCBIfam TIGR00829 JCVI: fructose PTS transporter subunit IIB IPR003353 Phosphotransferase system, fructose-specific IIB subunit 121 204 2.5E-33
SUPERFAMILY SSF52794 PTS system IIB component-like IPR036095 PTS system IIB component-like superfamily 2 101 3.66E-25

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.