Pseudomonas plecoglossicida NyZ12, RK21_RS12900
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas plecoglossicida strain NyZ12, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CATGCCTGGCTGGCCAGCCTGGACGATGAGCAGGCGCTGCAGATGGTGTTGCGCCAGGGTATTGCCGACCCGGCGCAGTTCGGCCCGAATGCGCCGCGCT CCACCGACGAGTTGCTCAGCTACCTGCGCCGCGCCCGCGAGCGCGGTTATGCCTGGGTCGAGGAAACCTCGGCCATTGGCACCTCGGCCCTGGCTGCGGT GGTGCGCCGCCCGCAAAGTGACGAGGTGATCGGTGTGCTGAGCATCGCCGGGCCCAGTGCGCGCCTGGCGCAAAGCCGCCTGGCAGAACTGGCGCCGCTG TTGCTGGCGGCGGCAGAGGAACTATCGGCGGCCAGCCGGGCCAGTGAGTTGTTCGCCTGAAGGTGCATTTCCGGTCGATTACCGCACACTCTGTCCTGCG GCTTCTTCTTAAAAGATGAACCTGGTTCTAAATTGTCGAATGTGGATTGTGGAATCAGATTCCGGAATCCGCATGACAACAATGACAAGAGGACAGGCTG
|
|
| DNA Sequence for Gene |
>RK21_RS12900
TTGAACGCACCCCTTCGTATTGCCTTGATCGGCGCCGGCAGCATGGGCCGCCAGCATTACCAGCATTTGCTGAATGTGCCGCAGGCCCAGCTGTGCGCTG TGGCCGACCCGGGCCCGCAGGCCGAGGCCTTTGCCGCCGAATGCGGCGTGCCCTGTTTTGCCGACCACCGCCAGATGCTGGAGCACGCGCGCCCCGAGGC AGTGATCGTCGCCAACCCGAACAACCTGCATGTCGCCACCGCCCTGGACTGCGTCGAGGCCGGTGTACCGGTGCTGGTCGAAAAACCGGTGGGCGTGCAC CTGGATGAAGTCCGCGCGCTGGTGGAAGCCTCGCGCCGCCACGATGTGCCGGTGCTGGTCGGCCATCATCGCCGGCACAACCCGCTGATCGCCAAGGCTC ACCAGGTGATTGCCGACGGCAAGCTGGGCCGATTGATCAACGTCACCGCGCTGTGGCAGTTGCAAAAGCCCGACAGCTATTTCGACACCCCCTGGCGCCG CGAGCCGGGCGCTGGCTTCCTGCTGACCAACCTGATCCATGACCTCGACCTGCTGCGCCACCTGTGCGGCGAGGTGGTACAGGTGCAGGCATTCACCCGC AACGATGTGCGCGGTTTTGCCAACGAGGACAGCGCCGCGGTGCTACTGCAGTTCGCCAATGGAGCATTGGGCAGCCTGACTGGCTCCGACGCGGTGGCCG CGCCGTGGAGCTGGGAGCTGGACTCCGGCGAAAGCCCGGTCTACCCGCGCCAGGATGGCCAGCCGTGCTACCTCCTGGCCGGCACCCAGGGGGCGCTGAG CATTCCGCAACTCAAGCGCTGGCACTACGCCGAGGCCGGGTCGGGCTGGCACACGCCGTTGTTGCAGAGCGAGGAAAGCATCCCCGCCGGCGAGGCATTG ACCTTGCAGTTGCAACACTTCGTACGGGTTGCCCGGGGTGAACAGGCGCCGCTGATCGATGCCGCCGATGGTGGCCGTACCCTGGCGCTGATCGAGGCGA TCCGCCAGGCAGCGGAAACTGGCCGGGCCTGTGTGCCCGAGCACATTGCTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ATTGTCGGGTGACGATAATGACTGATCGAATTTTCTCTCTGGCAGCGCTGACGGTACTCGAGCTGTCCCCGCCGGACATGGTCGAGGCAGCAGCCCGCGC CGGTTACAGCCACGTTGGCCTGCGCCTGGTGCCCGCCACCGAGCAGGAGCAGCATTTCCCGCTGGTGGCCGATGCCGGCCTGCGCCGGCAGACCCAGGCG CGCCTGCGCGACACGGGCATCAAGGTGCTCGACCTGGAGATCCTGAGGCTGAAGCCGGAAACCTGTGTCGCCGATTTCGAGCCGATCCTGGCGGTGGGCG CCGAGCTGGGCGGCACGGAGCTGCTGGTGGCTGGCAACGACCCGGATGAAGCGCGGCTGACCGAGCGCTTTGCTGCGTTGTGTGACCTGGCGGTGGGGTA TGGCATCCATCCGCATCTGGAGTTCATGCCCTGGACTGATGTGCGTGATCTGCGCCAGGCCATGCGGGTGGTGGCCAACGCTGACCGTGCCAATGGCTGT
|
|
| Amino Acid Sequence |
>oxidoreductase
MNAPLRIALIGAGSMGRQHYQHLLNVPQAQLCAVADPGPQAEAFAAECGVPCFADHRQMLEHARPEAVIVANPNNLHVATALDCVEAGVPVLVEKPVGVH LDEVRALVEASRRHDVPVLVGHHRRHNPLIAKAHQVIADGKLGRLINVTALWQLQKPDSYFDTPWRREPGAGFLLTNLIHDLDLLRHLCGEVVQVQAFTR NDVRGFANEDSAAVLLQFANGALGSLTGSDAVAAPWSWELDSGESPVYPRQDGQPCYLLAGTQGALSIPQLKRWHYAEAGSGWHTPLLQSEESIPAGEAL TLQLQHFVRVARGEQAPLIDAADGGRTLALIEAIRQAAETGRACVPEHIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|