Strain | Pseudomonas plecoglossicida strain NyZ12, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGAGGCGACCCGCTCGATAGTCGATTACCTGGCCTTCGCCCGGGCGTTCAACCAGGGCTTCCCAGGTTTCGTCGCCGACGTGCACGGCCTGCAGAATGAA AGCGGCCGCTACACGGTGGACTGCATCAAGGAATGCGAATGATCTCGACGCCGCTGCGCGCCAGTTCGAAGCGGTTTTCACCCAGATGGTTGACCTTGTC GCCGATTGCCAGGCGATAGGTGGTGATGGGCGCGCCCAGCGTGCTGCCGTCGGTTTGCAGGGTCGACTCCTGGAACTCGTGCACGGGGTAGATGCGGCCT TCGGCGTCACGGGCGTGGAATTGGCCGACCATTACTGCTGCCATTTGGGTGGAAACCTCTGAATTGCGTGGGAAATGTCTGCAGGCATAGACCGTGTAAC AGCGTCGGAAGTTTTCGCCCCGTGGAAAAAAAACCAAGGCGCCGAGGAACGGTCATCTATAACTACAACGTCCCTTTACTCAGCAAAGGTTGGAATTGCC
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DNA Sequence for Gene |
>RK21_RS04665
ATGAGCCAGGTGTATTCGGTAGCGGTTGTCGTCGGTAGCTTGCGCAAGGACTCCTACAACCGCAAGATCGCCCGCGCACTCTCGGAGCTGGCGCCGTCCA GCCTTGCCCTGAAGATCGTCGAGATTGGCGATTTGCCGCTGTACAACGAGGATGTCGAGGCCGAAGCAGCGCCGGAAGCGTGGAAGCGTTTTCGCGACGA GATCCGCCGCAGTGATGCGGTGCTGTTCGTCACCCCGGAGTACAACCGCTCGGTACCTGGCGGCCTGAAGAATGCCATCGACGTGGGCTCGCGGCCCTAT GGGCAAAGCGCCTGGAGTGGCAAGCCGGCGGCGGTGGTCAGTGTGTCGCCTGGGGCCATTGGTGGCTTTGGCGCCAACCATGCCGTGCGCCAGTCGCTGG TGTTTCTGGACATGCCATGCATGCAGATGCCCGAGGCCTACATCGGTGGTGCGGCTAGCCTGTTCGAGGATTCGGGCAAGCTCAATGACAAGACCCGGCC GTTCTTGCAGGCGTTTATCGACAAGTTTGCTTCCTGGGTGAAGTTGAACAGGGCGGTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCTGCCTTGAGCAATTATCGCTGAGCGCACGAACCCTGTAGGAGCGCCTTGTGTCGCGAAAGGGCTGCGCAGCAGCCCCAGGATTTCAGCTTCGCAACAT AAATTGCCGGGGCTGCTGCGCAGCCCTTTCGCGACACAAGGCCGCTCCTACAAAAAGCTGTGCACAGCGGCCTAGCGGAAGCTGTAGGAAACCCCGGCAT ACACGGCAAAGCCTTCGCCCGGTGTCGAACGGGCTTTATCCAGGCCTGCATCGTCGTAGGTGGGGGTCACCGTCGCCGCATAGCGCTTGTTGGTCAGGTT GCGCAGGTCCAGCCAGGTCTGCCAGTCCTGCTTCGGTGAATCCCAGCCCAGGCGTGCGCCGAGCAAGGCATATTCATCGGCGTGGTAGCTGTTGGCGTAG TCAACCTGCACCTTCGACGCCATCTGCGTATTCACCCCGGCATAGAAGCCGCTCGGCCAGTCATAGCGCAACTCGGCCTGGTAGTAGTGCATCGGGATGC
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Amino Acid Sequence |
>ACP phosphodiesterase
MSQVYSVAVVVGSLRKDSYNRKIARALSELAPSSLALKIVEIGDLPLYNEDVEAEAAPEAWKRFRDEIRRSDAVLFVTPEYNRSVPGGLKNAIDVGSRPY GQSAWSGKPAAVVSVSPGAIGGFGANHAVRQSLVFLDMPCMQMPEAYIGGAASLFEDSGKLNDKTRPFLQAFIDKFASWVKLNRAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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