Pseudomonas plecoglossicida NyZ12, RK21_RS04475

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas plecoglossicida strain NyZ12, complete genome. [Details]
DNA Sequence Upstream of Gene
GAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCGCCGAACATGCTGATGGTCGATCGCATCACCCATATCA GCGAAGAAGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGCTGGATATCAATCCGGACCTGTGGTTCTTCGCCTGCCACTTCGAAGGCGACCCGGT AATGCCGGGCTGCCTGGGCCTCGATGCCATGTGGCAGCTGGTAGGTTTCTTCCTCGGCTGGCAGGGCCTGCCAGGCCGCGGGCGCGCCCTAGGTTCGGGC GAGGTGAAGTTCTTCGGCCAGGTACTGCCGGAAGCCAAGAAAGTCACTTACAACATTCACATCAAGCGCGTCCTGAAGGGCAAGCTGAACATGGCCATCG CCGATGGCTCGGTCAGCGTCGACGGCCGCGAGATCTACACTGCCGAAGGCCTGCGGGTCGGCGTGTTCACCTCCACTGACAATTTCTAAGGGTTATTCGC
DNA Sequence for Gene
>RK21_RS04475
ATGCGCCGCGTCGTTATCACTGGTCTGGGCATCGTATCGTGCCTGGGCAATGACAAAGCTACCGTCACCGAAAACCTGCGCAACAGCCGTCCGGGTATCC GTTACAACCCGGAATACAAGGAAATGGGGCTGCGTAGCCAGGTTTCCGGGTCCATCGACCTCAACCTCGAAGAACTGATCGACCGCAAGGTCTACCGCTT CGTCGGCCACGCTGCTGCCTACGCCTACCTGGCGATGCAGGATGCGATCAAGGACGCCGGCCTGACCGAAGAGCAGGTTTCCAACCCGCGTACCGGCCTG GTGGCGGGCTCCGGCGGCGCCTCGACCCTGAACCAGATGGAAGCGCTGGACACCCTGCGTGAGAAAGGCGTCAAGCGCGTCGGCCCATACCGCGTTACCC GCACCATGGGCAGCACCGTTTCGGCGTGCCTGGCTACCCCGTTCAAGATCAAGGGTATCAACTACTCGATCTCCTCGGCCTGCGCCACTTCGGCACACTG CATCGGCACCGCGCTGGAGCAGATCCAGTGGGGCAAGCAGGACATCGTCTTCGCCGGTGGCGGTGAAGAAGAGCACTGGAGCCAGTCGTTCCTGTTCGAT GCCATGGGCGCTCTGTCGACCAAGCGCAACGAAACCCCGGAACAGGCCTCGCGCGCCTACGACGCCGACCGTGATGGCTTCGTCATCGCTGGCGGTGGCG GCATGGTGGTGGTCGAGGAGCTGGAACACGCCCTGGCCCGTGGCGCCAAGATCTACGCGGAAATCGTCGGCTACGGCGCCACTTCCGACGGCTACGACAT GGTTGCCCCGAGCGGCGAAGGTGCTATCCGCTGCATGCAGCAGGCGCTGTCGACCGTCGACACTCCGATCGATTACCTGAACACCCACGGCACCTCGACC CCGGTCGGTGACGTTGCCGAGATCAAGGGCGTTCGCGCCGTGTTCGGCGACAAGGCACCGAAAATCAGCTCGACCAAGAGCCTTTCGGGCCACTCGCTGG GCGCTGCCGGCGTACACGAGGCGATCTACTGCCTGCTGATGATGGAAAACAACTTCATCGCCGGCTCCGCCAACATCGACGAGCTTGACCCGGAGGTCGC CGACCTGCCGATCCTGCGCAAGACCGAAGAAAACGCCAAGATCGACACGGTCATGAGCAACAGCTTCGGCTTCGGCGGCACCAACGCCACCCTGGTGCTC AAGCGCTGGGAAGGCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GACGCTGCTGCGGTAAACGAAAACGCCCCGACTGGTTCGGGGCGTTTTCATTTGTATTGCCTGTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGC ACAGCACCGGTTTCAAGAGCAGCGCGGCCCCTGTGGGTTTACCCGCGAAAGGGCCGGCACAGGCGAAATACTATTGCTTGGGCAACACATCCAGAAAATT CTCCCTGGCCACCTTGTTGGCAACTTGTTCCGGCAATGCATCCAGAAACGGCCTGAACCCGTGCATCTGCTCCCCAAGGCTACCAAACCGCCCCACCACA TCCGAACCCAGCATGAACCGTTCCGGGAACCTCTCGACCAGTGCCAGCCACTCCTTGCGCGGTACACCCTGGCCATCCAGCAGATAGGGTTTCAGCACGC TCCACGACAAATCGACATACAGGTTCGGGTAATCCTCCAGCAACCGCGTCAGCACCGGCAGCAGAAAGTCCATTTGCGTCTGGTGCCGGTGAATCTCCAT
Amino Acid Sequence
>3-oxoacyl-ACP synthase
MRRVVITGLGIVSCLGNDKATVTENLRNSRPGIRYNPEYKEMGLRSQVSGSIDLNLEELIDRKVYRFVGHAAAYAYLAMQDAIKDAGLTEEQVSNPRTGL VAGSGGASTLNQMEALDTLREKGVKRVGPYRVTRTMGSTVSACLATPFKIKGINYSISSACATSAHCIGTALEQIQWGKQDIVFAGGGEEEHWSQSFLFD AMGALSTKRNETPEQASRAYDADRDGFVIAGGGGMVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAIRCMQQALSTVDTPIDYLNTHGTST PVGDVAEIKGVRAVFGDKAPKISSTKSLSGHSLGAAGVHEAIYCLLMMENNFIAGSANIDELDPEVADLPILRKTEENAKIDTVMSNSFGFGGTNATLVL KRWEGK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site