Strain | Pseudomonas plecoglossicida strain NyZ12, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGCTGGGAAGTCAAGAAGTAATACTGCTATACCCCCCACGCGCACAGAGGCCACCTTCGGGTGGCCTTTGTCGTTTCTGGGGGAATTCCTGTGCCGGCCT CTTCGCGGGCTTGCCCGCCCCCACATGAGATCTCCACTTTCCGGGGCTGTGGTGATCCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGGCA ACATGGATTTTTCGATGGCTTTGATAGGAATTTTCACGCAGACGAATGTTTCAATTCGAGGATAATTCTCGCTGTCCTCGGTCGCACAGACGACAAACAT GTACGCACATCGGACAAGCAGTACTGTGCCAGTGCGTTTGACTGACAAAACAGTTACATTACGCGCTCACTCTGTGCCCGTACCCCAAAAGGGAACGACA CGCTAAACGGGTCTGGCCTATCAAGCCGGGCAGCATTTCCCCTCATCCAAAGGGAAATCCCCTCTCGAATCCCGATTTCAGCAGTGTGGTACTACCTTAA
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DNA Sequence for Gene |
>RK21_RS04430
ATGAAAGTTCTCAAAGGCCAGGATATCCTGGCGCTTGGCTTTATGACGTTTGCGCTTTTCGTGGGCGCTGGCAACATCATCTTCCCGCCTATCGTCGGTC TGCAGTCTGGCCCGCACGTATGGATGGCGGCCCTTGGCTTCCTGGTTACCGCCGTAGGCCTGCCGGTCATCACCGTGGTCGCCCTGGCCAAGGTCGGCGG CGGCATGGATGCCCTGAGCAGCCCGATCGGCAAGTTCTTCGGTGGCCTGCTGGCGGCCGTGTGCTACCTGTCGGTCGGCCCGCTGTTCGCCACCCCGCGC ACCGCGACCGTATCGTTCGAAGTGGGTGTTGCGCCGCTGACCGGTGAAAGCCCCCTGGCGTTGTTCATCTACAGCCTGGTGTATTTTCTCGTGGTACTGG CCGTGTCCATGTACCCGGGCAAGCTGCTCGACACCGTGGGCCGCTTCCTGGCACCGTTGAAGATCATCGCCCTTGCGGTGCTGGGCATCGCCGCCTTCGC GCTGCCTGCCGGTACCATTGGTGAAGCGCAGCCGGCCTATGCCGCCGCAGCGTTCTCCAAGGGCTTCTCCGATGGTTACCTGACCATGGACACCCTGGGT GCCCTGGTGTTCGGTATCGTCATCGTCAACGCCATCCGCTCGCGCGGTGTCGAGTCGCCGAAACTGATCACCCGCTATGCCATCATCGCCGGCCTGATCG CCGGTGTCGGTCTGGCCCTGGTGTACATCAGCCTGTTCCGACTGGGTGCAACCAGCCACGAGATCGCGGCTGACGCTACCAACGGTGCGGCGGTACTGCA TGCCTATGTGCAGCACACCTTCGGTTCCCTGGGGAGCGGTTTCCTCGCCGTGCTGATCGCGCTGGCCTGCCTGGTGACCGCCGTTGGCCTGACCTGTGCC TGCGCCGAGTACTTCAGCCAGATGCTGCCGCTGTCGTACCGCGCACTGGTGGTGATCCTGGCGGGCTTCTCGCTGCTGATCTCCAACCTCGGCTTGACCA AGCTGATCATGTTCTCGATCCCGGTGCTCACCGCGATCTACCCGCCGTGCATCGTGGTGGTCGGGCTCAGCTTCGTGAAGGACCTGTGGAACTCGCCAAC CCGCATCCTGGCACCAGTGATGCTGGTATCGCTGCTGTTCGGCATGGTCGACGCGATCAAGGGCAGCAGCATTGCCCACGTGCTGCCGGACTTCATGGCT CACCTGCCGCTGAGCGACCAGGGCCTGGCCTGGCTGGTGCCTTCGGTGGTGACCCTGGTTGGTGCCGTGGCCTGCGACCGCATGCTCGGCAAGCCGCGCG AAGCGCTGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TAGTCGAAGCCTGAGGGCGGCACCGGCCACAAGCCGAAGGGTGCTCGCCAAGGGTGGAAACTCAAGAGCCCCGTATCCGAAAGGATGCGGGGCTTTTTGT TTGCTTGTACCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCAAGCGCAAACCTCAGAATTGGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAG AGGCCGGGATGAGCAGTGCAAATGTCAGGATGGATGTGTGCCTTTTGCCGCTTGCCAGCGTCGAAATCCGGTCCCTATCCTTCAGGTATCTGGCCCTCCC GGGAACCGTGCATGAACTTCATCCAAAGCAACTTCAACAACCTTTTGGCCATCATCTGGTTCGCCCTGTGCTGGGGCGGTTACACCCGCTATGCCATCTG GAAGGGCCGCGACACCGCGTGCCTGGCCAGCGTGCTGCACCTGTATCGCGAAGACTGGATGCGCCGCATGCTGCTGCGCGACAACCGCATTGCCGATGCC
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Amino Acid Sequence |
>branched-chain amino acid transporter 2 carrier protein BrnQ
MKVLKGQDILALGFMTFALFVGAGNIIFPPIVGLQSGPHVWMAALGFLVTAVGLPVITVVALAKVGGGMDALSSPIGKFFGGLLAAVCYLSVGPLFATPR TATVSFEVGVAPLTGESPLALFIYSLVYFLVVLAVSMYPGKLLDTVGRFLAPLKIIALAVLGIAAFALPAGTIGEAQPAYAAAAFSKGFSDGYLTMDTLG ALVFGIVIVNAIRSRGVESPKLITRYAIIAGLIAGVGLALVYISLFRLGATSHEIAADATNGAAVLHAYVQHTFGSLGSGFLAVLIALACLVTAVGLTCA CAEYFSQMLPLSYRALVVILAGFSLLISNLGLTKLIMFSIPVLTAIYPPCIVVVGLSFVKDLWNSPTRILAPVMLVSLLFGMVDAIKGSSIAHVLPDFMA HLPLSDQGLAWLVPSVVTLVGAVACDRMLGKPREALA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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