Pseudomonas plecoglossicida NyZ12, RK21_RS02935

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004356 glutamate-ammonia ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00120
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF55931
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006542 glutamine biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF54368
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006807 nitrogen compound metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00120
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppj01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppj00630 Glyoxylate and dicarboxylate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppj01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppj00220 Arginine biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppj00910 Nitrogen metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppj02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppj01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppj00250 Alanine, aspartate and glutamate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR43785 GAMMA-GLUTAMYLPUTRESCINE SYNTHETASE - - 17 453 3.5E-102
SMART SM01230 Gln_synt_C_2 IPR008146 Glutamine synthetase, catalytic domain 117 372 2.0E-99
SUPERFAMILY SSF55931 Glutamine synthetase/guanido kinase IPR014746 Glutamine synthetase/guanido kinase, catalytic domain 119 452 3.53E-107
Pfam PF00120 Glutamine synthetase, catalytic domain IPR008146 Glutamine synthetase, catalytic domain 118 450 5.4E-109
Gene3D G3DSA:3.30.590.10 Glutamine synthetase/guanido kinase, catalytic domain - - 120 453 3.6E-102
Gene3D G3DSA:3.10.20.70 - IPR036651 Glutamine synthetase, N-terminal domain superfamily 14 112 3.9E-5
SUPERFAMILY SSF54368 Glutamine synthetase, N-terminal domain IPR036651 Glutamine synthetase, N-terminal domain superfamily 8 112 7.32E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.