Pseudomonas plecoglossicida NyZ12, RK21_RS02280

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas plecoglossicida strain NyZ12, complete genome. [Details]
DNA Sequence Upstream of Gene
GGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGTGCGCATTCTACAGTTT CCAGAAAGGGTGTCAAGCGCTAGTCGTTGATTTTTTTGAAATTTCTATCAGCGCATTATTTGACGCAAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTT TTCTCGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGCCTGTGAGATCGA ATTCTACGGATTTACCCGCGGGTGTCAAGCTTTTTTCTGAAAAAACCTTTCTTGTTCAAACTCTTAGCATCTGTATATGGCTCGCAGCTCAGGCGCGACG GGTCTTTCAGGCCGATTATCGAGCAATGTCGCGCACAGGCTGCATACCCCAGGGCGCATGCGATACTATCTGTATGAATTTACAGTGCTGACGGTCATCC
DNA Sequence for Gene
>RK21_RS02280
ATGTCCTTGCGCAAGATCATCCACGTCGACTGCGATTGCTTCTATGCCGCGATCGAAATGCGTGACGACCCGCGCCTGGCCGGGCGGCCCATGGCGGTGG GGGGCTCGGCCGACCGCCGTGGGGTGATCGCCACCTGCAACTATGAAGCGCGTGCCTACGGCGTGCGTTCGGCCATGTCGTCGCGGCACGCGCTGAAGCT GTGCCCGGACCTGCTGATCGTCAAGCCGCGCTTCGAGGCCTACCGTGAAGCCTCGCGGGAAATCCACACGATCTTCCGTGACTACACCGAACTGATCGAG CCGCTGTCGCTGGACGAGGCCTACCTGGATGTAAGTGATAGCCAGTGGTACTCGGGCAGCGCCACGCGCATTGCCGAGGATATCCGCCGTCGTGTCGCCC GCACCCTGCATATCACTGTCTCGGCCGGTGTGGCGCCAAACAAGTTCCTGGCCAAGATCGCCAGTGACTGGCGCAAGCCCAATGGCCTGTTCGTGATTAC CCCGGGCGAAGTGGAGGCATTCGTCGCCGCCCTGCCGGTGGCCAGGTTGCACGGGGTGGGCAAGGTAACGGCAGACAAGCTGGCGCGGTTGGGTATCGAA ACCTGCCTGGAGCTGCGCGAATGGTCGCGTCTGGCGCTGGTGCGCGAGTTCGGCAGCTTTGGCGAGCGTTTGTGGGGGCTGGCACGGGGTGTCGATGAGC GTGCCGTGCACAATGACAGTCGCCGGCAGTCGGTCAGCGTGGAAAACACCTACGACACCGACCTGCCGGACCTGGCCAGTTGCCTGGCACGGCTGCCCGA ACTTCTGGAGAGCCTGAACGAGCGTATCGCCCGCATGGACAGCAGTTACCGGCCGGAAAAACCCTTCGTCAAGGTCAAGTTCCATGACTTCAGCCAGACC ACCATGGAGCAGGCGGGCGCAGGCAGGGACCTGGAGAGTTATCGCCAATTGCTGGGGCAGGCGTTTGCCCGTGGTGGCAAGCCGGTGCGCTTGCTGGGGG TAGGCGTGAGGTTGCGCGACTTGCGCGGGGCGCATGAGCAGTTGGAGCTGTTCCCGCCGAAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGGGGCTGCATGGCAGCCCCAACGTGTTACTGCGCGCCCGGGTCGGCCACCAACCGGCCAGTGGCCTTGGTCAGCGACTGCAGAAACTCCTGCTGCAACT CCGGATCGTTGCGGGTCAGTTCGATCAGGCTCTGTTCCATTTCACTGGCTTCTTCTTCCAGGCCGAGTTCGGACAAGCGCTTGACCCGGTGAACCCATTG GCCGACATCGTCATCTTCGAGGTCATCGAAGATCAGTTCATGGGCCTCGAGCAGTTTGTTGCGCAGGGTGGCGCTGACGAGCAGGCTGGCATCGCCACGT ACCGCGTTGTCCTCGTCCAGCACCTGCAGGTGCAGGGTACCGATGTGGTTGAGGTTCTGCTCGGAGAACGGGCTGTCGAGCAGGTTCAGGCGCAGCACGC CGTTCCTGTCGGTGGTCAGCTCGTGGGTCATCTTGCCGGCCTTGACCTCGACCAGGCGTTCGCTCCAGGGCACGCTGGTAGATTCCTCGCGCTTGCCTTT
Amino Acid Sequence
>DNA polymerase IV
MSLRKIIHVDCDCFYAAIEMRDDPRLAGRPMAVGGSADRRGVIATCNYEARAYGVRSAMSSRHALKLCPDLLIVKPRFEAYREASREIHTIFRDYTELIE PLSLDEAYLDVSDSQWYSGSATRIAEDIRRRVARTLHITVSAGVAPNKFLAKIASDWRKPNGLFVITPGEVEAFVAALPVARLHGVGKVTADKLARLGIE TCLELREWSRLALVREFGSFGERLWGLARGVDERAVHNDSRRQSVSVENTYDTDLPDLASCLARLPELLESLNERIARMDSSYRPEKPFVKVKFHDFSQT TMEQAGAGRDLESYRQLLGQAFARGGKPVRLLGVGVRLRDLRGAHEQLELFPPK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site