Pseudomonas plecoglossicida NyZ12, RK21_RS01980

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR33121	CYCLIC DI-GMP PHOSPHODIESTERASE PDEF	-	-	262	713	0.0
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	286	448	1.5E-46
FunFam	G3DSA:3.20.20.450:FF:000001	Cyclic di-GMP phosphodiesterase yahA	-	-	461	717	2.2E-88
Pfam	PF00563	EAL domain	IPR001633	EAL domain	466	702	8.8E-75
SMART	SM00052	duf2_2	IPR001633	EAL domain	460	707	6.1E-105
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	291	445	1.70039E-64
SUPERFAMILY	SSF141868	EAL domain-like	IPR035919	EAL domain superfamily	472	715	3.53E-86
FunFam	G3DSA:3.30.70.270:FF:000001	Diguanylate cyclase domain protein	-	-	285	451	6.9E-47
Gene3D	G3DSA:3.20.20.450	EAL domain	IPR035919	EAL domain superfamily	461	722	1.6E-97
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	290	445	3.2E-51
Pfam	PF03707	Bacterial signalling protein N terminal repeat	IPR005330	MHYT domain	134	186	2.0E-11
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	279	452	1.2E-58
Pfam	PF03707	Bacterial signalling protein N terminal repeat	IPR005330	MHYT domain	73	116	8.4E-14
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	295	452	3.53E-52
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	279	450	1.1E-68
CDD	cd01948	EAL	IPR001633	EAL domain	466	707	2.79124E-108

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.