Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_00073066, PPL01S_RS04565

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 strain NBRC 103162, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGATGCCGGGCCGCTGCCAGCCAACTTCCCGCGGCGCAATCGCATCATCAGTGGGCTGTCGCTGGGGGTACTGGTGGTCGAGGCCAGCCTGGCCAGTG GTTCCTTGATCACCGCTCGCCTGGCAGCCGAGCAGGGCCGCGAGGTCTATGCCATCCCCGGCTCGATCCACCATCACGCAGCGAAAGGCTGCCATCAGCT GATCCGGGACGGCGCGTTGCTGGTGGAAAGCGTGGAACAGATCCTGGAAACCCTCCAAGGTTGGCAGAACCTTCCGCCAGCCACTGTGGATAAAGCCTCG CATCCCTTGCTCGCATTGCTGCATGCTGCGCCGCAGACCACCGAGGCTCTGGCGCATGGCAGCGAGTTGCCTTTGGCCCAAGTGCTGGCGCAATTGACCG AGCTGGAGCTTGAAGGGCGAGTAAGTAATGAAGCCGGGCGTTGGTTTGCCCGCGTGGGCTAAGTAAACTGCGGCCATGGCTTAAATGCGGAGAGATACAA
DNA Sequence for Gene
>PPL01S_RS04565
ATGGTGAGCAGTTGGCGTGTGCAACAAGCCGCACGTGAGATTCGGGCGGGCGCGGTGATCGCCTACCCGACGGAAGCGGTCTGGGGCCTGGGCTGCGACC CTTGGAACGAGGACGCGGTATACCGCCTGCTGGCGCTCAAGTCGCGGCCTGTGGATAAAGGGCTGATCCTGGTCGCCGACAATATTCGCCAGTTCGATTT CCTGTTCGAGGACTTCCCCGAAGATTGGATCGATCGCATGGGCAGCACCTGGCCGGGGCCCAACACCTGGCTGGTACCGCATCAGGACCTGTTGCCCGAG TGGGTGACGGGGCAGCATGACACGGTGGCGCTGCGAGTCAGTGACCATCCGCAGGTGCGCGAGTTGTGTGCGTTGGTGGGGCCATTGATTTCCACGTCGT GCAACCCTGGCGGGCGGCCGGCGGCGAAGACCCGGTTGCGGGTCGAGCAGTACTTCCACGGGCAACTGGACCTGGTGCTCGGTGGGGCGTTGGGTGGGCG GAAGAATCCGAGTGTGATTCGTGACCTGGCGACCGGCGAGGTTGTTCGCCCGGGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCTCTTGGGTGAGCGCTCCTACAAAGGGGGCGCTGGCTTTTCTGAAGTGTCTTATCAAATACGAATTTGGGAAATTTCCTACAACTCGTATCGAGTACT ATCACCTTCTCAGTAGGAACACCTGCCTCTAGTCTTCACATCGTCGCCGAACAACTTGGCGATCGGGTGTGGTAACCCGAATCTGGAGAGTTCCTGACAG TCAATGGCGGCTGTACGCGGGAGGCCCCGTGCCTGCCGGGTTTAGGGAACTCTCCCCGGTTTACCACCCTGCGTACAGCTGCCACCTAATCGTGTGGTAA CGATTTGGTGGGGCATCGAAGCGAGAGTTTCCGATGAAAAAGATTGTTCCTGATCCGCCCATGCCCTGCACTTCCACCCGCCCCTTCGGCCGCTGCGACG CCGGCCACCCACCGCTCTTCACCGTTAACCCCGACATTCCCGCCGCCGATGCTTTGGTCCACGTGGCCCTGTATCTGCGTTGTGCCTACGAGACGGGCTA
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MVSSWRVQQAAREIRAGAVIAYPTEAVWGLGCDPWNEDAVYRLLALKSRPVDKGLILVADNIRQFDFLFEDFPEDWIDRMGSTWPGPNTWLVPHQDLLPE WVTGQHDTVALRVSDHPQVRELCALVGPLISTSCNPGGRPAAKTRLRVEQYFHGQLDLVLGGALGGRKNPSVIRDLATGEVVRPG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site