Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_00073066, PPL01S_RS05975

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 strain NBRC 103162, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AAGTGGAGCAGGAGATCCCGGCGGGGTTGTACCTGGCGGTGGCGCAGGTGCTGGCCTATGTGTTCCAGATCCGCCAGTACCGCGCGGGCAAGGGCAAGCG GCCGGAGCCGTTGAAGGAAGATCTGCCGATTCCGCCGGACCTGCGCCGCGACAATTGATCGTGTTTCGCCGTCCTGGGCCTGGCGTCAGAGGTGTGGTGG TAGCGAGATCGAGCGCCGCCCGCTCCTACGTTTGTTTCGGGCCAGTAACGCCTGTGGCAGGCGCGCGCGACCGCCTTGTTTGTACGACGCGATATCGAGC CATGCGCGAAGGCGTCCGCGCGCAGATCCCACTGGCATATTTGGCCAGAAACAAACGTAGGAGCGAGCGCAGCTCGCGATGCGCCGCGCGGGCGGCGCTC GATCTCAAAACCACCCCACATGCAAAGTTGGAAAGCTTCTTGCAGAGCCCACGCCCAAGCGCCCCCCGGGCGTCAAAGTTTTGCATGAAGAGGACTCGCG
DNA Sequence for Gene
>PPL01S_RS05975
GTGGATCGCACTCAGTTAATCAGCAACGCCCGCCAAAACCTGGCCGGTCTCGGCCGGGGCAACCTTGGGGTGCCGCTGTTGCTGCTGGTGATGTTGGCAA TGATGATGTTGCCGATACCGCCGTTCCTGCTCGATGTGTTCTTCACCTTCAACATCGCCCTGTCGATCGTCGTCCTGCTGGTCTGCGTGTACGCTTTGCG CCCGCTGGATTTCGCCGCTTTCCCCACCATCCTGCTGGTCGCCACGCTGTTGCGCCTGGCCCTGAACGTGGCCTCCACGCGCGTGGTCATGCTCCATGGC CAGGAAGGCCATGGCGCTGCCGGCAAGGTGATCCAGGCCTTCGGTGAAGTGGTCATCGGCGGCAACTACGTTGTCGGTGCGGTGGTGTTCGCCATCCTCA TGATCATCAACTTCGTGGTCGTGACCAAGGGTGCCGGGCGTATTTCCGAGGTGAGCGCGCGCTTCACCCTCGACGCCATGCCTGGCAAGCAGATGGCCAT CGACGCCGACCTCAACGCCGGCCTGATCGACCAGGCCCAGGCCAAGGCGCGCCGCGCCGAGGTGGCCCAGGAAGCCGAGTTCTACGGTTCGATGGACGGT GCCAGCAAGTTCGTCCGCGGTGACGCCATCGCCGGCCTGCTGATCCTGTTCATCAACCTGATCGGCGGCATGCTGATCGGCATGCTGCAGCACGGCATGA GCTTCGGCGACGCCGGCAAGGTCTACGCCCTGTTGACCATCGGTGACGGTTTGGTGGCGCAATTGCCATCACTTTTGCTGTCCACCGCCGCCGCGATCAT GGTCACCCGTGCCTCGGGTTCCGAGGACATGGGCAAGCTGATCAATCGGCAGATGTTCGATTCGCCCAAGGCGCTGGCGGTGTCGGCGGGACTGATGATC GTCATGGGCCTGGTGCCAGGGATGCCGCACATCGCCTTCCTCGGCCTCGGCCTGCTGGCCGCGGGTGGTGCCTACCTGGTATGGAAAAAGCAGCAGAAGA CCAAGGTGGAGGCGCTGCAGGAAGCGCAGCGTCAGCAAGACCTGCTGCCCTCGCCGCAGCGTGCGATGGAAACCAAGGAGCTGGGCTGGGACGACGTCAC CCCCATCGACATGATCGGCCTGGAGGTTGGCTACCGGCTGATTCCGCTGGTCGACCGCAACCAGGGCGGGCAGTTGCTGGCGCGGATCAAGGGGGTGCGC AAGAAGCTGTCCCAGGACCTGGGCTTTCTCATGCCCACCGTGCATATCCGCGACAACCTCGACCTGCAGCCCAGCGCCTACCGCCTGACGCTGATGGGCG TGATCCTGGCCGAAGCCGAGATCTACCCGGACCGGGAGCTGGCGATCAACCCCGGACAGGTATTCGGTACCCTCAACGGCATCGCCGCGCGCGACCCGGC GTTCGGCCTGGAGGCAGTGTGGATCGATATCGGCCAGCGTGCCCAGGCGCAGTCGCTGGGCTACACCGTGGTCGATGCCAGCACCGTGGTCGCCACCCAC CTCAACCAGATCTTGCAGAAGCACTGCCACGAGCTGATCGGCCACGAAGAAGTCCAGCAATTGCTGCAGGTATTGTCCAAGGCTTCGCCTAAACTTGCCG AGGAATTGGTACCGGGTGTCATTTCCTTGTCGGGATTGCTCAAGGTCCTGCAGGCGTTGCTTGCCGAGCAGGTGCCGGTGCGCGACATTCGCAGCATTGC CGAGGCCATCGCGAACAGCGCCGGCAAGAGTCAAGATACCGCCGCGCTGGTGGCGGCAGTGCGCGTCGGCTTGTGTCGCGCCATCGTGCAAAGCATTGTC GGCGTTGAGTCCGAGCTGCCTGTCATCACCCTTGAGCCAAGGTTGGAACAGATTTTGCTCAATAGTCTGCAAAGGGCCGGGCAAGGTCAGGAAGACGGTG TTCTTCTGGAGCCGAGCATGGCCGAAAAGCTGCAGCGTTCGTTGATCGAGGCGGCCCAGCGTCAGGAGATGCAGGGCCAGCCGGCTATCCTTCTGGTGGC CGGCCCGATCCGCGCCATGCTGTCGCGCTTCGGTCGCCTGGCTGTACCGAATTTGCATGTTCTGGCGTATCAGGAAATACCGGATAACAAGCAAGTCACC ATCGTTGCCACCGTGGGCCCCAACGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTAGTGGGTTATGCAAGTTAAGCGTTTTTTCGCCGCCGATATGCGTCAGGCCATGAAGCTGGTCCGTGATGAGCTGGGCGCCGATGCCGCCATCATCGG TAACCGCCGCATTGCCGGCGGTGTCGAACTGACGGCGGCGCTGGACTACAAACTGTCCGCGCTGGCCCCGCGCGTGCCCAACGCAGAACTCGAAGAAGAG CTGCGCAAGACCCAGACGCGCATCGCCACCGCCCAGGCCGAACTGGACAACCGCGAAGACGCCGCCGAAGGTAACCGCCAGTTGTTCGCCGGGCAGTCGC TGACCGCCTCGGAACCCTTGATCGAGCCCCACGTCGACATGCCGGCGGTGGCTGCCGCGCCAGCACCGGCGCCGGTCGACCCACGCCTGTTCGATGCCAT GCGCTCGGAACTCTCGGGGCTGCGCGAATTGCTCGAGGTACAACTCGGCTCGCTGGCCTGGAACCAGCTGCAAGGCAGCAAGCCGGCGCAGGCCAACCTG
Amino Acid Sequence
>flagellar biosynthesis protein FlhA
MDRTQLISNARQNLAGLGRGNLGVPLLLLVMLAMMMLPIPPFLLDVFFTFNIALSIVVLLVCVYALRPLDFAAFPTILLVATLLRLALNVASTRVVMLHG QEGHGAAGKVIQAFGEVVIGGNYVVGAVVFAILMIINFVVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQAQAKARRAEVAQEAEFYGSMDG ASKFVRGDAIAGLLILFINLIGGMLIGMLQHGMSFGDAGKVYALLTIGDGLVAQLPSLLLSTAAAIMVTRASGSEDMGKLINRQMFDSPKALAVSAGLMI VMGLVPGMPHIAFLGLGLLAAGGAYLVWKKQQKTKVEALQEAQRQQDLLPSPQRAMETKELGWDDVTPIDMIGLEVGYRLIPLVDRNQGGQLLARIKGVR KKLSQDLGFLMPTVHIRDNLDLQPSAYRLTLMGVILAEAEIYPDRELAINPGQVFGTLNGIAARDPAFGLEAVWIDIGQRAQAQSLGYTVVDASTVVATH LNQILQKHCHELIGHEEVQQLLQVLSKASPKLAEELVPGVISLSGLLKVLQALLAEQVPVRDIRSIAEAIANSAGKSQDTAALVAAVRVGLCRAIVQSIV GVESELPVITLEPRLEQILLNSLQRAGQGQEDGVLLEPSMAEKLQRSLIEAAQRQEMQGQPAILLVAGPIRAMLSRFGRLAVPNLHVLAYQEIPDNKQVT IVATVGPNG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site