Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_00073066, PPL01S_RS06765

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 strain NBRC 103162, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCTCGTTCGCCCGACGCGGCGACGACACCGGCCAGGCATCGCTGGCCAAGGCCGTCGACGCCTCGCTGCAGGTACTGGCCAACCGCATCAGTGCCTGCC ACTTGCAGTTGCACAGCCAGTTCGACGACCATCAACTGGCCATCGACCAGACGCGCCTGGAGCAGATCCTGGTCAACCTGATCGGCAATGCCCTCGATGC CATGACCACCCAGCCGCTGCCCGAGCTATGGCTGGAAGGCGAGCTGCAAGGCGACAAGTACCGCCTGCAGGTACGCGACAATGGCCACGGCATCGACGCC GAAGCACGCAAGCACCTGTTCGAACCTTTCTTCACCACCAAACCCGGCGAACACGGCCTGGGCCTGGGCCTGACCCTGTCGGCGAGCCTCGCCGCCGCCG CCAAGGGCAGCCTGAACGTCGAGCATCCCGCCAGTGGCGGCACCGCCTTCGTGCTTGCCCTGCCTCTGGTCACGCCCCCTAGCGAAACGGCAGAGCATCC
DNA Sequence for Gene
>PPL01S_RS06765
ATGAACCCAGCACCCCTTACCGTCCTGATCGTCGAAGACGACCCGCATGTGCTGCTCGGCTGCCAGCAAGCCCTGGCACTCGAAGACATCGCCTGCGAAG GGGTCGGCAGCGCCGAGCAAGCCCTGGAGCGCATCGGTGACGACTTCGCTGGCATCGTCGTCAGCGATATTCGCCTGCCAGGCATCGACGGCCTGGAGCT GCTCAACCGCCTCAAGGCCCGCGACCGCAGCTTGCCGGTGGTGCTGATCACCGGCCACGGCGATATCGACATGGCCGTCGGCGCCATGCGCAACGGCGCC TACGACTTCATGGAAAAACCCTTCTCGCCCGAACGCCTGGTCGACGTGGTCAGGCGCGCCCTGGAACAGCGCGGACTGTCGCGCGAGGTGTTCGCCCTGC GCCGCCAGCTCGCCGAGCAGAGCAGCCTGGAGGGGCGCATCATTGGCCGCTCGCCGGCGATGGAACAGTTGCGCGAACTGATCGCCAACGTGGCCGACAC GTCGGCCAACGTACTGATCGAAGGCGAAACCGGGACAGGCAAGGAGCTGGTCGCGCGATGCCTGCACGATTTCAGCCGTCGCCAGGGCCAGCCTTTCGTG GCGCTGAACTGCGGTGGGTTGCCGGAGAATCTGTTCGAGAGCGAGATTTTCGGCCACGAGGCCAATGCCTTTACCGGGGCAGGCAAGCGCCGCATCGGCA AGATCGAGCATGCCAACGGCGGCACCCTGTTCCTCGACGAAGTCGAGAGCATGCCGATCAACTTGCAGATCAAGCTGCTGCGCGTCCTTCAGGAGCGCAC CCTGGAGCGCCTGGGCTCGAACCAGAGCATCCCGGTGGACTGCCGGGTGATCGCCGCGACCAAGGCCGAGCTGGCCACCCTGGGCCAGAGCGGCCAGTTC CGCAGTGACCTCTACTACCGCTTGAACGTGGTCACCCTCGAATTGCCCCCCCTGCGTGAACGGCGCGAAGACATTCGCCAGCTGTTCGAGCACTTCCTGC AGCAATCGGCACTGCGCTTCGACCGGGAACTGCCGCAGCTGGACAGCCAGACCCTGTCCCGGCTGATGTCCCACGACTGGCCGGGCAACGTGCGCGAGCT GCGCAACGTCGCCGAACGTTTCGCCCTGGGCCTGCCTGCCTTCAAGAAGGGCCCGACCGGCGGCGCCAGCCAGGGGCTGGGTTTTGCCGAGGCGGTCGAG GCCTTCGAGCGCAATCTGCTCGGCGACGCCCTGCAACGTACCGGCGGCAATCTCAGCCAGGCCAGCCAGGAACTGGGCATGGCCAAGACCACGCTGTTCG ACAAGGTGAAAAAGTACGGGCTTGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AATCGGCAAGGGAAGCGTTGCTCGCCTGCTGAAAGCTGACGCAACTCCTGTGGGAGCCGGCTTGCCGGCGATAGCGCAGGCCTTTCGATCTGAGCCCCTA CAGGCCGGCGATATGCGTCACGTTCTGTCGGTGTGATTGCAGGTACGGCAACACCGCCCCGAGCAATGGCGCCTTGAACGGCTCCTGGAAGCGGTGCGCC AACCCCGGAATCAGGCGCAGCTCGCTGCCGCGGATATGCGCCGCCAGGTGCACGCCATGCATGACCGGCAACAACGGATCGGCCGTGCCATGCACCACCA GGGTTGGCACCCGCAGTCGATCGAGCAGCGCCACCCTGCTCGGCTCGGCCAGGATCGCCATGATCTGGCGCTTGGCCCCTTCGGGATTGAACGCTCGATC ATAGGCCGCTGCAGCCTGCTGCAACAGCACTGCCCGATCGTCTCGCACCTGCGGGCTACCGAGCGCCGCCAACAGGTCGGCCTGCTGCTCGATGGCGACC
Amino Acid Sequence
>Fis family transcriptional regulator
MNPAPLTVLIVEDDPHVLLGCQQALALEDIACEGVGSAEQALERIGDDFAGIVVSDIRLPGIDGLELLNRLKARDRSLPVVLITGHGDIDMAVGAMRNGA YDFMEKPFSPERLVDVVRRALEQRGLSREVFALRRQLAEQSSLEGRIIGRSPAMEQLRELIANVADTSANVLIEGETGTGKELVARCLHDFSRRQGQPFV ALNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHANGGTLFLDEVESMPINLQIKLLRVLQERTLERLGSNQSIPVDCRVIAATKAELATLGQSGQF RSDLYYRLNVVTLELPPLRERREDIRQLFEHFLQQSALRFDRELPQLDSQTLSRLMSHDWPGNVRELRNVAERFALGLPAFKKGPTGGASQGLGFAEAVE AFERNLLGDALQRTGGNLSQASQELGMAKTTLFDKVKKYGLG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site