Pseudomonas parafulva CRS01-1, NJ69_RS20365

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas parafulva strain CRS01-1, complete genome. [Details]
DNA Sequence Upstream of Gene
ATCGCCGCCCGCGACCGCCTGCAACCCTCGCTGCTCGATCGTCTGACCGACGATGATCCCGGCAACCCGCAGGAAGCTCCGGACAAACGCGTACTGTCGC TGCAACAGCTCAAGGCCTCGGTCCTGCGCGACTTGGCCTGGCTACTGAACACCACCTCGTTGCTCGACAGCGACGACACCCTGAATACCCCGGCCGGCAC CTCGGTGATCAACTACGGACTGCCTGCGTTGGCCGGCAACTGCGCCACCAACATCGATCTGCAGGCCCTTGAGCGCATCATTCATCAAGCCATCGCCACC TACGAGCCGCGCATCCTGACCCACACGCTGCGTGTCCGAGCCCTGGCCGCGCCGGCTGAAATGAATGCCAACGCCCTGAGTTTCGAAATCGAAGGCGACC TCTGGGCCCAGCCCGCGGCCCTGCCACTGCTGCTGCAGACCGACCTGGACCTGGAGTCTGGGCAGGTGCGTGTAACCACCGCCGATCGCCGGAGACGCGC
DNA Sequence for Gene
>NJ69_RS20365
ATGAATCCGCGCTTGCTCGAACTGTACAACCAAGAACTGCGCCACATCCGCGAGAGCGCTGCGGAATTTGCCCGTGAGTATCCCAAGATCGCCGGGCGCC TGACGCTCTCCGGCATCGAATGCGCCGACCCTTACGTCGAGCGCCTGCTCGAAGGCTTTGCCTACCTCACCGCACGGGTGCAGTTCAAACTCGACGCCGA GTATCCGACCTTCACCCACAACCTGCTGGAAATCGCCTACCCGCACTACCTGGCACCGACCCCGTCGATGACCATCGTGCAGTTGCAGACCGACCCCGAC GAGGGCTCGCTCAGTGCCGGTTTCCCGCTGCCGCGCGGCAGCGCATTACGCGCCAACCTGGGCCGCGATTCGCAAACCCCCTGCGAATTCCGCAGCACGC AAGAGGTGACCTTGTGGCCGCTGCAGGTGGCGCGCGCAGAGTACTTCGGCAACCCAGGCGCGGTACTCGGTCGCCTCGCTGCCAGCGAGCCCAAGGCTCG TGCGGCCTTGCGCCTGACCCTGCGCAGCGGCGCCGAGATTCCGTTTTCCAGCCTGCCACTCAAGCACTTGCCGTTGTACCTCAATGGTGCCGACGAGATG CCCTACCGCCTGTACGAGCAGTTGCTCGGCAGCGCCTGCGCGGTGTTCGCCCGCCAGCCCGGCGCCGACTGGGTCGAGCGCATCCCGCTGGAACAGGCGC TGCGCCCATGCGGTTTCGACGACCATGAGGCCGCCCTGCCGGTGGTGCCGCAAGCCTTCCAGGGCTACCGCCTGCTGCAGGAGTATTTCGCCCTGCCGCA ACGGTTCCTGTTCGTCGACTTCGCCGGGCTCGAGCGCGCGGTCAAGCGCTGCAACGGCCAGGAGCTGGAACTGCTGGTCCTGTTCGAGCGTTTCGATTCG ACCTTGGAAAACAGTGTTGGCGCCGAGCGCCTGGTGCCCTTTTGCACCCCGGCGATCAACCTGTTTCCACGCCGCACCGACCGCATTCATCTGACCGACA AGGTCAACGAGCACCATGTGATCGCCGACCGCACCCGGCCCACCGACTTCGAAATCCACTCACTGCAGGCCGTCACCGGTCACGGCACGGGCTCGGACCA GTCGTTCCTGCCGTTCTATGCGGTGCGCGACCCATCGCGCTACGGTCGCGACCAGGCGTACTACATCCTGCGCCGCGAACAGCGCGTATTGTCCAGCGAG CAGCGGCGTACCGGCACGCGCTCGAGTTACATGGGCAGCGAGACGTTCATCAGCCTGGTCGACGGCCAGCAGGCGCCCTACCGACACGACTTGCGCCAGT TGGGTATCAGCGCGCTGTGCAGCAACCGCGACCTGCCACTGTTCATGAACGTGGGCGACGGACGCAGCGATTTCAGCCTGGCCGACAGCGCGCCGGTTTC TGCGGTGCGCTGCCTGGCAGGTCCCAGCCGGCCGAAGGCCAGCCACGCCCACGACAACCGCGCCTGGCGCCTGATCAGCCAGTTGTCGCTCAATTACTTG TCGCTCACCGAGCAGGGTCAAGGGGCGGCAGCGCTGCGCGAGCTGTTACGCCTTTACGGCGACAGCCAGGACAGCGCCTTGCATCTGCAAATCGAAGGCC TGCGCGAGGTCAGCGCCAAACCTTGCACGCGACGCCTGCCGATGCCAGGACCCATCGTGTTCGGCCGAGGCCTGGAAATCACTCTGGAATTCGACGAGAA CGCCTTCCGCGGAACAGGCGTGTTCCTGCTCGGTGCAGTATTCGAGCGTTTCCTGACGCGTTACGTCTCCATCAACAGCTTTACCGAAACCGTGCTGCGC ACCACCGAGCGCGGCGAGATCATGCGATGGAAAGCCAAGCCCGGACGCAGGCCGAGCCTGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACATACTCGAGGCCATGCACGCCGAACCCTGGGCGTTCGACTTCTTTCAGGCGCTACGCCGCCTGGAGACCGAGCACCCAGATTTGCCGCGCTTTGGCCA TGCCCAGCGCCTGGCCGACGAACCCGTGCGTCTGGGTCAGCACCTCGATTGCAGCTTCGCGCCGGCGACACTGGCCTCGATAACCTACAGCGACATCGGG CCCGCGCGTCTGGAGCAGTTCTTCTTCGGCCTTGGCGGCCCCAACGGCCCACTGCCACTGCACCTGACCGAGTACCTGCGCGAGCGCGAGCGCAACCACG CCGACCACACCAGCAAGCGCTTCCTCGACATCTTCCACCACCGCCTGCTGACGCTGTTCTATCGGGCTTGGGCCGAGGCACGGCCGACAGTCAGCCACGA CCGGCCCGACGACGACTATTGGGCCGCGCGCCTGGCGGCGCTGATCGGCCGAGGTCAGCCCGAACTGCAGCACCAAGGCCCACTGCCATATACGGCCAAA
Amino Acid Sequence
>type VI secretion system protein ImpG
MNPRLLELYNQELRHIRESAAEFAREYPKIAGRLTLSGIECADPYVERLLEGFAYLTARVQFKLDAEYPTFTHNLLEIAYPHYLAPTPSMTIVQLQTDPD EGSLSAGFPLPRGSALRANLGRDSQTPCEFRSTQEVTLWPLQVARAEYFGNPGAVLGRLAASEPKARAALRLTLRSGAEIPFSSLPLKHLPLYLNGADEM PYRLYEQLLGSACAVFARQPGADWVERIPLEQALRPCGFDDHEAALPVVPQAFQGYRLLQEYFALPQRFLFVDFAGLERAVKRCNGQELELLVLFERFDS TLENSVGAERLVPFCTPAINLFPRRTDRIHLTDKVNEHHVIADRTRPTDFEIHSLQAVTGHGTGSDQSFLPFYAVRDPSRYGRDQAYYILRREQRVLSSE QRRTGTRSSYMGSETFISLVDGQQAPYRHDLRQLGISALCSNRDLPLFMNVGDGRSDFSLADSAPVSAVRCLAGPSRPKASHAHDNRAWRLISQLSLNYL SLTEQGQGAAALRELLRLYGDSQDSALHLQIEGLREVSAKPCTRRLPMPGPIVFGRGLEITLEFDENAFRGTGVFLLGAVFERFLTRYVSINSFTETVLR TTERGEIMRWKAKPGRRPSL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site