Pseudomonas parafulva CRS01-1, NJ69_RS18625

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00528
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00528
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppv02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30450 ABC TRANSPORTER PERMEASE - - 7 222 1.0E-74
PRINTS PR00173 Glutamate-aspartate symporter signature - - 34 53 4.8E-5
Pfam PF00528 Binding-protein-dependent transport system inner membrane component IPR000515 ABC transporter type 1, transmembrane domain MetI-like 45 219 3.0E-17
CDD cd06261 TM_PBP2 IPR000515 ABC transporter type 1, transmembrane domain MetI-like 56 168 7.20502E-8
PRINTS PR00173 Glutamate-aspartate symporter signature - - 159 178 4.8E-5
FunFam G3DSA:1.10.3720.10:FF:000002 D-methionine ABC transporter permease MetI - - 11 223 2.6E-88
Gene3D G3DSA:1.10.3720.10 - IPR035906 MetI-like superfamily 11 220 1.6E-43
SUPERFAMILY SSF161098 MetI-like IPR035906 MetI-like superfamily 12 210 1.57E-41
PRINTS PR00173 Glutamate-aspartate symporter signature - - 61 80 4.8E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.