Strain | Pseudomonas parafulva strain CRS01-1, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CCGCACTGGCGCCTGCGTCGTGACCAGTGGTTGCTGCGTCTGCCGCGGGTCGGCGCGTTGTTGCAGGTGCTGGAAAGCGCGCGCCTGGCGCGCAGCCTGG CGATTCTCTGCGGCAGCGGCGTGGCGCTGCTCGAAGCCTTGCAGGTGGCCAGCGACACGGTGGCCAACCAGCGCATCCGCCTGGCCCTGGAGCAGGTGCG CCTGCAGGTGCAGGGCGGCACCAGCCTGCACCGGGCGCTCGATGCCTGCGGCCAGTTCCCGCCGCTGCTGGTGAACATGGTCGGCAGCGGTGAGGCCAGC GGCACCCTGGCCGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTCGCGCGCCAGGTGGACACCGCCATGGCGCTCTTCGAACCCCTGATGA TCCTGGTGATGGGCGGCGTGGTGCTGTTCATCGTGCTGGCGGTGCTGTTGCCGATCATGCAGCTCAACCAGGGTCTGCAACTGTGAAAAGGAGCCCCCTC
|
|
DNA Sequence for Gene |
>NJ69_RS13445
ATGCCCTCATGCGCCAAGCGCCAGCGCGGTTTCACCCTGATGGAAATCATGGTGGTGATCTTCATCATCGGCCTGCTCATCGCCGTGGTCGCGCCCAGCG TGCTGGGCAACCAGGACAAGGCCATGCGCCAGAAAGTCATGGCCGACCTGGCCACGTTGGAACAGGCCCTGGACATGTACCGTCTGGATAACCTGCGCTT TCCCAGCACCGAGCAGGGGTTGGCTGCGCTGGTGAAGAAGCCGACCCAGGAACCGCTGCCCCGCGCCTGGCGCAGCGATGGCTACATTCGCCGGCTGCCT GAAGACCCTTGGGGCACGCCTTATCAGTACCGCATGCCCGGTGAGCATGGCCGGGTCGATGTCTATTCGCTCGGCGCCGATGGCGCGGCCGGGGGCGAAG GGCTGGACGCCGACCTGGGCAACTGGGCGCTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GATGTCGGGCCAACGCGGCTTCAGCCTGCTCGAACTGCTGGTGGTGCTGGCCATCGCCGGGCTGATGAGCGGGCTGAGCGTGGCCTGGCTCGACACCGGT CATTCGGCCGCCGAGCAGGCCTTGCAGCGTCTGGCGGCGGCGGTGCGCGAGCAGTCTGGCCTGGCCCGCCACGGTGGGCAGTTGCGCGGCTTGCGCTGGA GCGGCAAACGCCCGGAGTTCGTTCGCCATGATGGCAATGGCTGGAGAGTGGAACCGGTGGCGTTGGGCGAGTGGCCCGCGCAGTTACGCCCGGACTGGCT GGCCGCCGAGGCGCCGCAACTGGTGTTCACCCCCGACGGCTGGGCTCGGCCCGGCACGTTGCAGTGGCGCTGGCCCGAAGGCGCGCAGCGCTGGAGGTGG GCCCGGGACGGGCGTTTGCAGGTGGTGGAGCGTCCATGAAAGCGCGGCAACGGGGATTCACGTTGCTGGAGGTGTGCGTCGCGCTGGGCATTGCGGCGGT
|
|
Amino Acid Sequence |
>general secretion pathway protein GspG
MPSCAKRQRGFTLMEIMVVIFIIGLLIAVVAPSVLGNQDKAMRQKVMADLATLEQALDMYRLDNLRFPSTEQGLAALVKKPTQEPLPRAWRSDGYIRRLP EDPWGTPYQYRMPGEHGRVDVYSLGADGAAGGEGLDADLGNWAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|