Pseudomonas parafulva CRS01-1, NJ69_RS13090

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas parafulva strain CRS01-1, complete genome. [Details]
DNA Sequence Upstream of Gene
AAGCCGGCGAGAACGCCGCCAAGGTCCAGCTGATTCTCGAAGATGGCAGCACGTTCGCGCGCGAAGGTCGCCTGGAGTTTTCCGAGGTCTCGGTCGACGA GTCCACCGGTTCCGTGACCCTGCGCGCCGTCTTCCCCAACCCGGACCACACGCTGCTGCCAGGCATGTTCGTGCATGCGCGCCTGCAGGCTGGGGTCAAC GCCAATGCGATCCTGGCGCCCCAGCAAGGGGTGACCCGCGACCTCAAGGGCGCGGCCACCGCGCTGGTGGTGAACCAGGACAACAAGGTCGAACTGCGCC AGCTCAAGGCAACCCGCACCTTGGGCAACGAGTGGTTGGTCGAGGACGGCCTGAAGGCAGGCGACCGCCTGATCACCGAAGGTCTGCAGTACGTGCGTCC AGGTGCCGAGGTCAAGGTCAGCGAGGCCACCAACGTCAAGAAGCCGGGCAGCCCTGACCAGCCCAACTCGGCGAAAGCAGACGCCAAAGCGGAGTAAACC
DNA Sequence for Gene
>NJ69_RS13090
ATGTCGAAGTTCTTTATCGATCGCCCGATCTTCGCCTGGGTGATCGCCTTGGTGATCATGCTGGTCGGGGCCCTGGCAATCCTCAAGCTGCCGATCAACC AATACCCCAGCATCGCGCCGCCGGCCATCGCCATCGCCGTGACCTACCCCGGCGCCTCCGCGCAGACCGTGCAGGACACCGTGGTGCAGGTCATCGAGCA GCAGCTCAACGGCATCGACAACCTGCGTTACGTGTCCTCGGAGAGCAACTCCGACGGCAGCATGACCATCACCGCGACGTTCGAGCAGGGCACCAACGCC GACACGGCGCAGGTCCAGGTGCAGAACAAGCTGAACCTGGCCACGCCCCTGCTGCCACAGGAAGTACAACAGCAAGGTATCCGCGTCACCAAGGCGGTGA AGAACTTCCTGCTGGTGATCGGCCTGGTGTCCGAAGACGGCAGCATGACCAAGGACGACCTGGCCAACTACATCGTCTCCAACATGCAGGATCCGATCTC GCGTACCGCCGGTGTCGGTGACTTCCAGGTGTTCGGTGCACAGTACGCCATGCGTATCTGGCTCGACCCGGCCAAGCTCAACAAATACCAGATGACCCCG GTGGACGTGCGCACGGCCGTGACCGCGCAGAACGTCCAGGTGTCCTCAGGGCAACTGGGCGGCCTGCCTGCCATGCCTGGCACCCAGCTCAACGCGACCA TCATCGGCAAGACCCGCCTGCAGACCGCCGAGCAGTTCGAGAAGATCCTGCTGAAGGTCAACAACGACGGTTCGCAGGTGCGCCTGGGTGACGTGGCCAA GGTTGGCCTGGGCGGCGAAAACTATGCCGTCAGCGCCCAGTTCAATGGCAAGCCGGCCTCCGGATTGGCAGTCAAGCTGGCTACTGGCGCAAACGCCCTG GATACCGCCAAAGCGCTGCGCAAGACCGTGCAGGACCTGGAGCCTTTCTTCCCGCCAGGGGTCAAGGCGGTGTTCCCGTATGACACCACCCCGGTGGTCA CCGAATCGATCAGCGGCGTGATCCACACCCTGATCGAAGCGGTGGTGCTGGTGTTCCTGGTGATGTACCTGTTCCTGCAGAACTTCCGCGCCACCATCAT CACCACGATGACCGTACCGGTGGTCCTGCTGGGCACCTTCGGCATCCTTGCCGCAGCGGGTTTCAGCATCAACACGCTGACCATGTTCGCCATGGTGCTG GCCATCGGCTTGCTGGTGGACGACGCCATCGTCGTGGTGGAAAACGTCGAGCGGGTGATGTCCGAGGAAGGGTTGCCGCCCAAGGAGGCGACCAAACGCT CGATGGAGCAGATCCAGGGCGCCCTGGTGGGTATCGCCCTGGTGCTGTCGGCGGTACTGCTGCCCATGGCCTTCTTCGGCGGTTCCACCGGGGTGATCTA CCGGCAGTTCTCCATCACCATCGTCTCGGCCATGGGCCTGTCGGTGCTGGTGGCACTGGTCTTCACCCCGGCGCTGTGCGCAACCATGCTCAAGCCGCTG AAAAAAGGCGAGCACCATACCGCCAAGGGTGGATTCTTCGGTTGGTTCAACCGCAACTTCGATCGCAGCGTACAAGGCTATGAACGCAGCGTCGGCGGCA TCCTGCGCAACAAGATCCCGTTCCTGTTGGCCTACGTGTTGATCGTGGTGGGCATGATCTGGCTGTTCATGCGCATCCCCACCGCATTCCTGCCCGAAGA AGACCAGGGCGTGCTGTTCGCCCAGGTGCAGACGCCGGCCGGCTCCAGTGCCGAGCGCACCCAGGCGGTGGTCGACCAGATGCGCGAGTACCTGCTCAAG GACGAAGCCGACACCGTGTCGTCGGTGTTCACCGTGACCGGCTTCAACTTCGCCGGCCGCGGCCAGAGCTCGGGCATGGCCTTCATCATGCTCAAGCCCT GGGGCGAGCGCTCGTCGGAGAACAGCGTCTTCAATCTGTCGACCCGTGCGCAGCAGCACTTCTTCGGCTTCCGCGATGCGATGGTATTCGCCTTCGCCCC GCCTGCGGTACTGGAGCTGGGTAACGCAACCGGCTTCGACGTCTTCCTTCAGGACCGTGCTGGTGTCGGCCACGAGAAACTCATGGAAGCGCGCAACCAG TTCCTCGCCAAGGCCTCGCAGAGCAAGATCCTGGCCGGGGTACGCCCGAATGGCCTGAACGATGAACCGCAGTACCAACTGATCGTCGACGACGAACGCG CCAGCGCTTTGGGCGTGACCATCGCCGACATCAACAACACCCTGTCGATCGCCCTCGGCGGCAGCTACGTCAACGACTTCATCGATCGCGGTCGGGTCAA GAAGGTGTACATCCAGGGTGAAGCCAATGCCCGCATGAGCCCGGAAGACCTGCAGAAGTGGTACGTGCGCAACGGCAAGGGCGAAATGGTGCCGTTCTCC TCCTTCGCCAAGGGTGAATGGACCTACGGCTCGCCGAAACTCTCGCGCTACAACGGCGTGGAAGCGGTCGAGGTGCTCGGTGCACCGGCGCCTGGCTACA GCACCGGTGAGGCGATGGCCGAGGTCGAACGCATCATTGGCGAGTTGCCAAGCGGTGTGGGCTTCTCCTGGACCGGCATGTCCTACGAGGAAAAACTCTC TGGCTCGCAGATGCCCGCGCTGTTCGCCCTGTCGCTGCTGTTCGTGTTCCTCTGCCTGGCAGCGCTGTACGAAAGCTGGTCGATTCCGATCGCCGTGGTC CTGGTCGTGCCCCTGGGCATCATCGGTGCGCTGATCGCCACCAGCTTGCGCGGCCTCTCCAACGACGTCTACTTCCTGGTCGGCCTGCTGACCACGATCG GCCTGGCGGCGAAGAACGCCATCCTGATCGTCGAGTTCGCCAAGGAGCTGCACGAACAGGGCAAGAGCCTGTACGACGCGGCAATCGAGGCGTGCCGCAT GCGTCTGCGCCCGATCATCATGACCTCGCTGGCGTTCATCCTCGGCGTGGTACCGTTGACCATCGCCAGCGGCGCAGGCTCGGGCAGTCAGCATGCCATC GGTACCGGCGTGATCGGCGGCATGATCAGCGCAACCGTGCTGGCGATCTTCTGGGTACCGCTATTCTTCGTCGCTGTGTCGTCGCTGTTCGGCAGCAAAG AGCCGGAACACGACTTCACCCCTGAAACTCCACGTAATGAGGCTGGGCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCAAGTCTTTGCTGTCCCTGACAGTCACCGCGTTCATTCTCGGCGGCTGCTCGCTGATTCCCGATTACAAGACCCCGGACGCTCCGGTGCCCGCGCAATG GCCGCAAGGCCCGGCCTACTCGCCGACCGAGTCGGCCGACGTGGCCGCCGCCGAGCAGGGCTGGCGCCAGTTCTTCAACGACCCGGCGCTGCAGAAGCTG ATCCAGACCGCGCTGGTCAACAACCGCGACCTGCGCGTGGCGGCGTTGAACATCGACGCCTACCGTGCGCAGTACCGCATCCAGCGCGCCGACCTGTTCC CGGCGGTGTCGGCCACCGGCAGCGGCAGTCGCCAGCGGGTGCCAGCGGACATGTCGCAGACTGGCAGCTCGAACATCAACAGCCAGTACTCGGCGACCCT CGGGGTCAGCGCTTACGAGCTGGACCTGTTCGGCCGCGTACGCAGCCTCAGCGAGCAGGCCCTGGAAATCTACCTGTCCAGCGAACAGGCACGGCGCTCC
Amino Acid Sequence
>multidrug efflux RND transporter permease subunit
MSKFFIDRPIFAWVIALVIMLVGALAILKLPINQYPSIAPPAIAIAVTYPGASAQTVQDTVVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTNA DTAQVQVQNKLNLATPLLPQEVQQQGIRVTKAVKNFLLVIGLVSEDGSMTKDDLANYIVSNMQDPISRTAGVGDFQVFGAQYAMRIWLDPAKLNKYQMTP VDVRTAVTAQNVQVSSGQLGGLPAMPGTQLNATIIGKTRLQTAEQFEKILLKVNNDGSQVRLGDVAKVGLGGENYAVSAQFNGKPASGLAVKLATGANAL DTAKALRKTVQDLEPFFPPGVKAVFPYDTTPVVTESISGVIHTLIEAVVLVFLVMYLFLQNFRATIITTMTVPVVLLGTFGILAAAGFSINTLTMFAMVL AIGLLVDDAIVVVENVERVMSEEGLPPKEATKRSMEQIQGALVGIALVLSAVLLPMAFFGGSTGVIYRQFSITIVSAMGLSVLVALVFTPALCATMLKPL KKGEHHTAKGGFFGWFNRNFDRSVQGYERSVGGILRNKIPFLLAYVLIVVGMIWLFMRIPTAFLPEEDQGVLFAQVQTPAGSSAERTQAVVDQMREYLLK DEADTVSSVFTVTGFNFAGRGQSSGMAFIMLKPWGERSSENSVFNLSTRAQQHFFGFRDAMVFAFAPPAVLELGNATGFDVFLQDRAGVGHEKLMEARNQ FLAKASQSKILAGVRPNGLNDEPQYQLIVDDERASALGVTIADINNTLSIALGGSYVNDFIDRGRVKKVYIQGEANARMSPEDLQKWYVRNGKGEMVPFS SFAKGEWTYGSPKLSRYNGVEAVEVLGAPAPGYSTGEAMAEVERIIGELPSGVGFSWTGMSYEEKLSGSQMPALFALSLLFVFLCLAALYESWSIPIAVV LVVPLGIIGALIATSLRGLSNDVYFLVGLLTTIGLAAKNAILIVEFAKELHEQGKSLYDAAIEACRMRLRPIIMTSLAFILGVVPLTIASGAGSGSQHAI GTGVIGGMISATVLAIFWVPLFFVAVSSLFGSKEPEHDFTPETPRNEAGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site