Strain | Pseudomonas parafulva strain CRS01-1, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GTACAACGCATTGAAAGCTTGTCGAGGACTTTATGGCTAACGAAAACGAGATCACCTCCCCGGAGGAACAGGCCCTGGCCGATGAGTGGGCCGCGGCCCT GGAAGAGACCGGCGATGCCGGCCAGGCTGACATCGACGCGCTGCTGGCCGCCGATGCCGGACGCGCCTCCGGCCCCGGTCGCTTGCCGATGGAAGAGTTC GCCAGCTCGCCACGGCCGAACGAGAACGTCAGCCTCGAAGGCCCGAACCTGGATGTGATCCTGGACATTCCGGTGAGCATCTCGATGGAAGTGGGCGCCA CGGAAATCAGCATCCGCAACCTGTTGCAACTGAACCAGGGCTCGGTGATCGAGCTCGACCGCCTGGCCGGTGAGCCGCTCGACGTACTGGTCAACGGTAC CCTGATCGCGCACGGCGAGGTTGTGGTGGTCAACGAGAAGTTCGGCATCCGCCTGACCGACGTGATCAGCCCAAGCGAACGCATCAAGAAGCTGCGCTGA
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DNA Sequence for Gene |
>NJ69_RS10905
GTGAAGGCCATGATTCGCGCCCTGGGCGCCTGCGCGGCCCTGCTCGCCAGCGAGGCGGTGCTGGCCAGCGCTGCCGTCGCGCCGGCGCCCGCCACGGCCC CCGCGCCTGACAGCCTGAGCGGACAACTGGCGCAGATGGTCCTGGGCCTGCTGTTGGTGGTCGGGGTGATCTTCCTGCTGGCCTGGTTGCTGCGGCGCAT GCAACTGGCGCAACCGCGTGGCGGCCAGGTCATCGAGATCCTCGGCAGCCGAGCCCTGGGGCCGCGGGATCGGCTGGTGCTGGTGCAGGTGGGCAAGGAG CAGATTCTCATCGGTCACAGCCCTGGCAGCATCGAAGCCCTGCATGTGCTGGCCGAACCCGTGCCGGTGCCGGACAGCGCGCGCCAGGCCGCGCCGGAGT TTGCCCAGCGCCTGCTCGAATTGATGGGCAAGGATGGCAAGCACGACAAGGACAACCGCCGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACCGCGCGTTGCGCACGATCCTGACCCTGGCGCTGCTGCTGGCCGCGCCGCTGGCCTTGGCCGCCGATCCGTTGTCGATCCCGGCCATCACCTTGAGCAA CGGGCCGAACGGCCAACAGGAATATTCGGTCAGCCTGCAGATTTTGCTGATCATGACGGCGCTGAGCTTCATTCCAGCGTTCGTCATTCTGATGACCAGC TTCACCCGCATCATCATCGTCTTCTCCATCCTGCGTCAGGCCCTGGGCCTGCAGCAGACGCCCTCGAACCAGTTGCTGACCGGCATGGCGCTGTTCCTGA CGATGTTCATCATGGCGCCGGTGTTCGACCGGGTGAACCGCGATGCCCTGCAGCCCTACCTGAACGAGCAGATGACCGCCCAGCAGGCGATCGACAAGGC CCAGGGCCCGCTGAAGGACTTCATGCTGGCGCAGACCCGGCAGAGTGACCTGGACCTGTTCATGCGCCTGTCCAAGCGCACCGACATCGCCAGCCCCGAC
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Amino Acid Sequence |
>flagellar assembly protein FliO
MKAMIRALGACAALLASEAVLASAAVAPAPATAPAPDSLSGQLAQMVLGLLLVVGVIFLLAWLLRRMQLAQPRGGQVIEILGSRALGPRDRLVLVQVGKE QILIGHSPGSIEALHVLAEPVPVPDSARQAAPEFAQRLLELMGKDGKHDKDNRR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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