Pseudomonas parafulva CRS01-1, NJ69_RS02795 (relA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas parafulva strain CRS01-1, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TTGCCCTGCCGCTGGCACGTCAGGCGCGCGAAGTGGTCGCGGTGGAGGGCGTGCAAACCATGGTTGACCGCGCCGCCGCCAACGCGCAGGCCAACGATGT GCATAACGTGCAGTTTTTTCAGGCCGATTTATCGCAGTCGCTGGCTGCTGCCGAGTGGGCCGCCGAGGGCTTTTCTGCGGTACTCTTGGACCCACCTCGC GACGGTGCCCACGAGGTGGTGCAAGGCATCGCCCGGCTCAAGGCCCGGCGATTGGTGTATGTATCGTGCAACCCCGCGACGCTGGCGCGAGATGCGCAGG TGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCCCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCCA GTAACGGCTGGCCCCTTGGTAGCGCTTCCACGGAATGGAAGCGGTACGGTTGATTGCCAGTGCGTCCGTTGGGCGCGCTGTATGGAAAGGTAAACGAAAC
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| DNA Sequence for Gene |
>NJ69_RS02795
|relA
ATGGTACAGGTGAGAGTGCACCAGCCGGTCAACACCGACGGCAGTATCAACCTCGATGCATGGCTCGATCATGTGGTGAGCGTCGATTCGGCGCTGGATC GCACGGCCCTCAAAGAGGCCTGCGATTTCGCCCAGGACGTCGAGAAGAAGGGCAACCCCGCCAAGCACTCCTGGGCCGACGGCACCTCGAGTTTCCAGGC GGGCCTGGAAATCGCCGAGATCCTCGCCGACCTCAAGCTCGACCAGGATTCGCTGGTCGCCGCCGTGATCTATCGCTCGGTGCGCGAGGGCAAGGTGACC TTGGCCGAGGTCGGTCAACGTTTCGGGCCCGTGGTGTCCAAGCTGGTCGACGGGGTGCTGCGCATGGCGGCCATCAGTGCCAGCCTCAGTCCGCGCCAGT CGCTGGTGCTCGGCTCCCAGGCCCAGGTGGAAAACCTGCGCAAGATGCTGGTGGCGATGGTCGATGACGTGCGTGTGGCGCTGATCAAGCTGGCCGAGCG CACCTGCGCCATCCGTGCGGTGAAGTCTGCCGATGACGAAAAGCGTCTGCGCGTGGCCCGCGAGGTGTTCGACATCTATGCACCGCTGGCCCACCGCCTG GGTATCGGCCACATCAAGTGGGAACTCGAAGACCTTTCGTTCCGCTACCTGGAGCCCGACCAGTACAAGCAGATCGCCAAGCTGCTGCACGAGCGAAGGC TGGACCGCGAGCGGTTCATCTCCGATGTGATGAACCAGTTGCAGAACGAACTGCTGGCCACCGGCGTCAAGGCCGACATCAGCGGCCGGGCCAAACATAT CTATTCGATCTGGCGCAAAATGCAGCGCAAAGGCCTGGAATTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTCCCGGAAATCCGCGACTGC TACACCGCGCTGGGTATCGTCCACACCTTGTGGCGGCACATTCCCAAGGAATTCGACGACTACGTCGCCAATCCCAAGGAAAACGGCTACCGCTCGTTGC ACACGGCGGTGATCGGCCCCGAGGGCAAGGTGCTCGAAGTGCAGATCCGCACCCACGGCATGCACGAAGAAGCCGAACTGGGCGTCTGTGCGCACTGGAA GTACAAGGGCACCGACGTCAAGTCCAGCTCCAACCATTACGAAGAGAAAATTTCCTGGTTGCGCCAGGTGCTGGAGTGGCACGAGGAACTCGGCGACATT GGCGGCCTGGCCGAGCAACTGCGGGTCGACATCGAGCCGGACCGGGTCTACGTGTTCACCCCCGATGGCCACGCCATCGACCTGCCCAAGGGCGCCACGC CGCTGGATTTCGCCTACCGCGTGCACACCGAGATCGGCCATAACTGCCGAGGCGCCAAGATCAACGGGCGCATCGTGCCGCTGAACTACAGCCTGCAGAC CGGCGAGCAGGTGGAGATCATCACCAGCAAGCACGGCAGCCCGAGCCGTGACTGGCTGAACTCCAACCTGGGCTACGTCACCACCTCGCGGGCGCGGGCC AAGATCGTCCACTGGTTCAAGTTGCAGGCGCGCGACCAGAACGTCGCGGCCGGCAAGACCCTGCTCGAGCGCGAGCTCAGCCGCTTGGGGCTGCCGCAGG TCGACTTCGAACGCCTGGCGGAAAAGGCCAACGTCAAGACTGCCGAAGACCTGTTCGCGGCCCTGGGGGCTGGTGATCTGCGCCTGGCTCATCTGGTCAA CGCCGCCCAGCAGTTGATCGAGCCGGAGCGCATCGAGCAGGTCGAGTTGATTCCGCGCGCGGCGCGCGGCACCCGTGCCGGCAAGCGCAGCGACATCCAG ATCCAGGGGGTCGGCAACCTGCTCACGCAGATGGCGGGCTGCTGCCAGCCGCTGCCGGGCGATGCCATCGTCGGTTACATCACCCAGGGGCGCGGGGTGA GTATCCACCGCCAGGATTGCGCCTCGGTGCTGCAATTGGCTGGCAAGGAACCCGAGCGCATCATTCAGGTGAGCTGGGGGCCGATTCCGGTGCAGACCTA TCCGGTCGATATCGTCATCCGCGCCTACGACCGGCCGGGGCTGCTGCGCGATGTGTCGCAGGTGCTGCTCAACGAGAAGATCAACGTGCTGGCGGTCAAC ACCCGGTCGAACAAGGAAGACAACACCGCGCTCATGTCGCTGACCATCGAGATTCCCGGCCTGGATGCATTGGGGCGCCTGCTCGGGCGCATCTCGCAAC TGCCGAATATCATCGAGACGCGGCGTAATCGCACGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GACCGTACCCCCTTGTCAGGCTGACCCCGCCCCAGTGGGCGCGGGGTCAGCCGCGATGAAACCGCCACCGAAGGACTTGCCCCCATGACTTACGCCCTGG ACGACCTGCTGCACCTCATGGCCCGTCTGCGCGACCCGCAGTTCGGTTGCCCGTGGGACGTGGAGCAGGACTACGCCAGCATCATCAAGCACACCCTCGA GGAAGCCTACGAGGTGGCCGATGCCATCGAGCAGGGCGATCTGGTCCAGTTGCAGGGCGAGCTCGGCGACCTGCTGTTCCAGGTGGTCTACTACAGCCAA TTGGCGCGCGAGGACGGGCGGTTCGATTTTGCTGACGTGGTCGATTCGATCACCCGCAAGCTGATCCGTCGTCATCCCCACGTGTTCCCAACGGGCGACT TGTACGCACCCGTCGATGCCCCGCGCCTGAGCGAAGCGCAGGTCAAGGCGCGCTGGGAGCAGATCAAGGCCGAGGAGCGCGCCGAGAAGAGCACGCCTGA
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| Amino Acid Sequence |
>(p)ppGpp synthetase
MVQVRVHQPVNTDGSINLDAWLDHVVSVDSALDRTALKEACDFAQDVEKKGNPAKHSWADGTSSFQAGLEIAEILADLKLDQDSLVAAVIYRSVREGKVT LAEVGQRFGPVVSKLVDGVLRMAAISASLSPRQSLVLGSQAQVENLRKMLVAMVDDVRVALIKLAERTCAIRAVKSADDEKRLRVAREVFDIYAPLAHRL GIGHIKWELEDLSFRYLEPDQYKQIAKLLHERRLDRERFISDVMNQLQNELLATGVKADISGRAKHIYSIWRKMQRKGLEFSQIYDVRAVRVLVPEIRDC YTALGIVHTLWRHIPKEFDDYVANPKENGYRSLHTAVIGPEGKVLEVQIRTHGMHEEAELGVCAHWKYKGTDVKSSSNHYEEKISWLRQVLEWHEELGDI GGLAEQLRVDIEPDRVYVFTPDGHAIDLPKGATPLDFAYRVHTEIGHNCRGAKINGRIVPLNYSLQTGEQVEIITSKHGSPSRDWLNSNLGYVTTSRARA KIVHWFKLQARDQNVAAGKTLLERELSRLGLPQVDFERLAEKANVKTAEDLFAALGAGDLRLAHLVNAAQQLIEPERIEQVELIPRAARGTRAGKRSDIQ IQGVGNLLTQMAGCCQPLPGDAIVGYITQGRGVSIHRQDCASVLQLAGKEPERIIQVSWGPIPVQTYPVDIVIRAYDRPGLLRDVSQVLLNEKINVLAVN TRSNKEDNTALMSLTIEIPGLDALGRLLGRISQLPNIIETRRNRTP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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