Strain | Pseudomonas parafulva NBRC 16636 = DSM 17004 strain NBRC 16636, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GACGTGCCCTATGAAACCGACGAAGAGCGCGAGTGCGCCGAAGGGGTAGGCGGCTATGCACGCCCAATGCCGGCCAGCTGGATGCAACGCCAGGCACAGG CTGTGCACGAGCGCGCCAAGCAGGCAGATATCGTCATTACCACGGCGCTCATCCCGGGCCGCAAGGCGCCTACCTTGCTCAGTGCCGAGACCGTTGCCCA AATGAAACCTGGCTCGGTGGTGATCGACCTGGCAGCCGCGCAGGGCGGCAACTGCCCACTGACCGTCGCCGATCAGGTGGTGCAAGCGCACGGCGTGACC ATCGTCGGGCCGACCAACCTCCCCGCGCAGGTAGCCGCCGACGCCTCGGCACTGTATGCCCGCAACCTGCTGGACTTCATGAAGCTGCTGTTCGACAAGG ACGGCGCGCTGACCATCAACCTGGAAGACGACATCGTCGCGGCCTGCCTCATGTGCCGCGACGGGCAGATCGTCCGCAAGAACGGCTGAGGAGCACGACA
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DNA Sequence for Gene |
>PPA02S_RS01495
ATGGAAGACATGCTGATTTCCCATGGCATCTACAACCTCATCATTTTCGTGCTGGCCATCTACGTGGGCTACCACGTGGTGTGGAACGTTACCCCGGCGC TGCACACACCACTGATGGCGGTTACCAACGCCATTTCTGCCATCGTCATCGTCGGCGCGATGCTGGCTGCGGCACTGACCGTAACCCCCGCCGGCAAGGT GATGGGCACCCTGGCCGTTGCCCTTGCGGCAGTCAACGTCTTCGGTGGCTTTCTGGTCACCCGGCGCATGCTTGAGATGTTCAAGAAAAAAACCAAGAAC GAGGGGCAGAAGTCAGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCATGAATCTGGTAACGCTTCTGTACCTGGTTGCCTCGGTGTGCTTCATCCAGGCACTCAAAGGCCTGTCGCACCCCACCACGTCACGGCGCGGCAACCT GTTCGGCATGATCGGCATGGGTATCGCCATCCTCACCACGGTTGGCCTCATCTATAAGCTGGGTGCCGAGCTCGCTACTGCCGGCATCGGCTACGTGCTT GTCGGCCTGCTGGTCGGTGGTACGGCCGGTTCGATCATGGCCAAGCGCGTCGAGATGACCAAGATGCCGGAGCTGGTCGCCTTCATGCACAGCATGATCG GCCTTGCGGCAGTGTTCATCGCCATTGCTGCGGTACTCGAACCCCAGTCCATGGGTATTGTCGCCGCCATCAGCGACCCGATCCCCACGGGCAACCGGCT GGAACTGTTCTTGGGCGCAGCCATTGGTGCCATTACCTTCTCCGGTTCGGTGATCGCGTTTGGCAAACTGTCGGGCAAATACAAGTTCCGCCTGTTCCAG
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Amino Acid Sequence |
>NAD(P) transhydrogenase
MEDMLISHGIYNLIIFVLAIYVGYHVVWNVTPALHTPLMAVTNAISAIVIVGAMLAAALTVTPAGKVMGTLAVALAAVNVFGGFLVTRRMLEMFKKKTKN EGQKSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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