Pseudomonas parafulva NBRC 16636 = DSM 17004, PPA02S_RS06380

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas parafulva NBRC 16636 = DSM 17004 strain NBRC 16636, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCAGATGAACTTCGTCGACAACCAGGTCAACCCGCGCACCGGCACCATTCGTGGCCGCGCGGTGTTCGACAACAAGGCCGGCGGCTTCACCCCGGGGCT GTACGCCCGGCTCAAGCTGGTGGGCAGTGCCCAGTACGATGCTGTGCTGATCAACGATGAAGCCGTGGGTACCGACCTTGGCAAGAAGTTCGTGCTGGTC ATGGACAAGGACAACAAGGCAGCGTACCGCGCCGTCGAACTGGGGCCCAAGCTCGAAGGCCTGCGCATCGTGCGCAGTGGCCTGGGCAAGGACGACCGCA TCGTGGTCAAGGGCCTGCAACGCGTACGCCCGGGCTCCCAGGTAACGCCAGAGGAGGCGCCGATGGCCAGCGAGCAGACGCTGGCTGCACTCGCCCAGCA GCGCCAGGCCCTGGAAGCCAGCAACCCCACGCCCAAGGTGGCAGGCAATAACGCTAAAGCTGCCAGTGCCCAAGCGCCGCGCGGTTAAGGGAACACACCG
DNA Sequence for Gene
>PPA02S_RS06380
ATGAACTTCTCAAAATTCTTCATCACCCGGCCTATCTTCGCCGCGGTGCTGTCGCTGGTACTGCTGATTGCCGGCTCGATTTCACTGTTCCAGCTGCCGA TCAGCGAGTACCCCGAAGTGGTGCCGCCTACGGTGGTGGTGCGCGCCAACTTCCCCGGCGCCAACCCCAAGGTCATCGGCGAAACCGTCGCGGCGCCGCT GGAGCAGGCCATCACCGGGGTGGAGAACATGCTCTACATGTCTTCCCAGTCCACCGCCGATGGCAAGCTGACGCTGACCATCACCTTCGCCCTGGGCACC GACCTGGACAACGCTCAGGTGCAGGTGCAGAACCGCGTGACCCGCACCCAGCCCAAGCTGCCAGAAGAAGTGACCCGCATCGGTATTACCGTCGACAAGG CGTCCCCGGACCTGACGATGGTGGTGCACCTGACCTCACCGGACAACCGCTACGACATGCTGTACCTGTCCAACTATGCCATCCTCAACATCAAGGACGA ACTGGCGCGCCTGGGCGGTGTGGGCGACGTGCAGCTGTTCGGCATGGGTGACTACTCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCCTCGCGCAAC CTGACCGCCAGCGACGTGGTGGCCGCGATCCGTGAGCAGAACCGTCAGGTGGCGGCAGGCCAGCTGGGCGCACCGCCCGCACCGGGCTCCACCAGCTTCC AGCTGTCGATCAATACCCAGGGCCGGCTGGTCAACGAAGAAGAGTTCGAGAACATCATCATCCGCGCTGGCGCGGACGGTGAGATCACGCGCCTGAAGGA CATCGCCCGGGTGGAGCTCGGTTCCAGCCAGTACGCCCTTCGCTCGCTGCTGAACAACCAGCCGGCGGTCGCCATCCCGATCTTCCAGCGCCCAGGCTCC AACGCCATCGACATCTCGGACGAGGTGCGGGCAAAGATGGCCGAACTGAAAAAAGACTTCCCCGAGGGCATGGACTACAGCATCGTCTACGACCCAACCG TCTTCGTCCGCGGCTCCATCGAGGCGGTGGTGCACACCCTGTTCGAAGCGCTGGTGCTGGTGGTACTGGTGGTGATCCTGTTCCTGCAGACCTGGCGCGC GTCGATCATCCCGCTGCTGGCAGTACCGGTTTCGCTGATTGGTACGTTTGCCGTCATGCACCTGTTCGGGTTTTCGCTCAACGCGTTGTCCCTGTTCGGC CTGGTACTGGCGATCGGTATCGTGGTGGACGACGCCATCGTCGTGGTGGAGAACGTCGAGCGCAACATCGGCCTGGGTCTGAAACCGCTGGAGGCCACCC AGAAAGCCATGAGCGAGGTCACCGGCCCGATCATCGCCACCGCGCTGGTGCTGTGCGCAGTGTTCGTGCCTGCCGCGTTCATTTCCGGCCTCACCGGCCA GTTCTACAAACAGTTCGCGCTGACCATCGCCATTTCCACCGTGATCTCGGCGTTCAACTCCCTGACCCTGTCTCCGGCCCTGGCTGCGGTGCTGCTCAAT GAACATCATGCACCCAGGGACCGCTTCTCGCGCCTGCTCGACAGGTTGCTGGGTAGCTGGCTGTTCGCGCCGTTCAACCGCTTCTTCGACCGTGCCAGCC ACCGCTATGTGGGCGGCGTGCGCCGGGTCATCCGCTCCAGTGGCATTGCACTGTTCGTGTATGCAGGGCTGATGGGCCTGACCTACCTGGGCTTCTCGTC GACCCCGACGGGTTTCGTGCCCGCCCAGGACAAGCAATACCTGGTGGCCTTCGCCCAACTGCCAGACGCCGCCAGCTTGGACCGCACTGAAGCGGTCATC AAGCGCATGAGCGAAATCGCCCTCAAGCAACCCGGCGTGGCCGACTCGGTGGCCTTCCCTGGCCTGTCGATCAACGGTTTCACCAACAGCCCGAACAGCG GCATCGTGTTCACGCCGCTCAAGCCGTTTGACCAGCGCAAGGACCCGAGCCAGTCGGCTGCAGCCATTGCTGCCGCGCTTAACGCCCAGTTCGCCGACAT CCAGGACGCCTACATTGCCATCTTCCCGCCACCACCGGTACAAGGCCTGGGCACCATCGGCGGTTTCCGCCTGCAGATCGAAGACCGCGGCAACCTGGGT TATGAAGCACTGTATAAAGAAACCCAGAACATCATCGCCAAGAGCCACGACGTGCCAGAGCTGGCGGGCTTGTTCACCAGCTACCAGGTGAACGTACCCC AGGTGGACGCGGCCATCGACCGGGAAAAGGCCAAGACCCATGGCGTGGCGATCACCGATATCTTCGACACCCTGCAGGTGTACCTGGGCTCGCTGTACAC CAACGACTTCAACCGCTTCGGGCGCACGTACCAGGTGAACGTCCAGGCTGAACAGCAGTTCCGCCTGGATGCCGAGCAGATCGGCCAGCTGAAGGTACGC AACAACCTGGGCGAAATGATCCCGCTGGCCACGTTCCTCAAGGTCAGCGACACATCCGGGCCTGACCGGGTAATGCATTACAACGGTTTCATCACCGCCG AGATCAATGGCGCCGCAGCCCCCGGCTACAGCTCTGGCCAAGCCGAGGCGGCCATCGAAAAACTGCTCAAGCAGGAACTGCCCAACGGCATGACCTACGA ATGGACCGACCTTACCTACCAACAAATCCTGTCGGGCAATACGGCGTTGTTTGTGTTCCCGCTGTGCGTACTGCTGGCCTTCCTGGTGCTTGCCGCCCAG TACGAGAGCTGGAGCCTGCCATTGGCGGTGATCCTGATCGTGCCCATGACGCTGCTGTCGGCCATCACCGGGGTGATCGTGTCGGGCGGTGACAACAACA TCTTCACCCAGATCGGCCTGATCGTACTGGTGGGCCTTGCCTGCAAGAACGCCATCCTGATCGTTGAGTTCGCCAAGGACGAACAGGCCAAGGGCCTCGA CCCGCTGGCAGCCGTGCTCGAAGCATGCCGCCTGCGTCTGCGCCCGATCCTGATGACATCGATCGCCTTCATCATGGGTGTGGTGCCGCTGGTGTTCAGC TCCGGGGCCGGCTCGGAAATGCGCCATGCCATGGGTGTGGCAGTGTTCTCGGGGATGATCGGCGTGACGGTGTTCGGCCTGTTCCTTACCCCGGTGTTCT TCTTCCTGATCCGCCGTTTCGTCGAACGTCGCCAGGCCCGCAAGGCCCAGCACGCGCCTTCGCTGGAGAGCCACGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCTGCTCAAACCCTTGACCCCAAGCCTGCTGGCATTGGCCCTGGCAGCCTGCGCCGTGGGGCCGGACTACAACGCCCCGGCCACAGCCCCTGCGCAATT GGCGGGGGGCAGCCAGGCCCAGGGCTATGACCGCAGCCGCTTCGAAACCCTGTGGTGGAAGCAGTTCGACGACCCGGTGCTGAACCAGCTGGTTCAGGCT TCGTTGCAGGGCAACCGTGACTTGCGGGTAGCCTTTGCTCGGCTGAAGGCTGCGCGTTCGATCCGTGAGGACGCCGAGAACGACCCCTTCCCCGTGGTCA CCAGCCGCGCCAGCAGTGAGATTGGCAAAGGCCAGGTGCCAGGCCAGACGGAGCGCCGGGTCAACACCGAGCGCTATGACCTGGGCCTGGACATGGCGTG GGAACTTGACCTGTTCGGCCGCATCCAGCGTCAGATAGAAGCCAGCCAGGCGCAGGAGGCGGCGGCAGCCGCAGACCTGCAACAGTTGCAGGTCAGCCTG
Amino Acid Sequence
>multidrug efflux RND transporter permease subunit
MNFSKFFITRPIFAAVLSLVLLIAGSISLFQLPISEYPEVVPPTVVVRANFPGANPKVIGETVAAPLEQAITGVENMLYMSSQSTADGKLTLTITFALGT DLDNAQVQVQNRVTRTQPKLPEEVTRIGITVDKASPDLTMVVHLTSPDNRYDMLYLSNYAILNIKDELARLGGVGDVQLFGMGDYSLRVWLDPNKTASRN LTASDVVAAIREQNRQVAAGQLGAPPAPGSTSFQLSINTQGRLVNEEEFENIIIRAGADGEITRLKDIARVELGSSQYALRSLLNNQPAVAIPIFQRPGS NAIDISDEVRAKMAELKKDFPEGMDYSIVYDPTVFVRGSIEAVVHTLFEALVLVVLVVILFLQTWRASIIPLLAVPVSLIGTFAVMHLFGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNIGLGLKPLEATQKAMSEVTGPIIATALVLCAVFVPAAFISGLTGQFYKQFALTIAISTVISAFNSLTLSPALAAVLLN EHHAPRDRFSRLLDRLLGSWLFAPFNRFFDRASHRYVGGVRRVIRSSGIALFVYAGLMGLTYLGFSSTPTGFVPAQDKQYLVAFAQLPDAASLDRTEAVI KRMSEIALKQPGVADSVAFPGLSINGFTNSPNSGIVFTPLKPFDQRKDPSQSAAAIAAALNAQFADIQDAYIAIFPPPPVQGLGTIGGFRLQIEDRGNLG YEALYKETQNIIAKSHDVPELAGLFTSYQVNVPQVDAAIDREKAKTHGVAITDIFDTLQVYLGSLYTNDFNRFGRTYQVNVQAEQQFRLDAEQIGQLKVR NNLGEMIPLATFLKVSDTSGPDRVMHYNGFITAEINGAAAPGYSSGQAEAAIEKLLKQELPNGMTYEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ YESWSLPLAVILIVPMTLLSAITGVIVSGGDNNIFTQIGLIVLVGLACKNAILIVEFAKDEQAKGLDPLAAVLEACRLRLRPILMTSIAFIMGVVPLVFS SGAGSEMRHAMGVAVFSGMIGVTVFGLFLTPVFFFLIRRFVERRQARKAQHAPSLESHA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site