Pseudomonas parafulva NBRC 16636 = DSM 17004, PPA02S_RS12390

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas parafulva NBRC 16636 = DSM 17004 strain NBRC 16636, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGCAGCTTCCTGCAGGTGGGGGCCTTCGCCAACCCGGACGCCGCCGAGCTGTTGCGCTCGAAGTTGAGCAGCATGGTCAGCGCGCCCGTGTTCATCAGC TCGATCGTACGCAACCAGCAGACCCTGCACCGCGTGCGCCTGGGGCCGATCAACAGCCAAGGTGAAATCCAGCAGGCGCAGAACAGCATCCGCCTGGCGA ACTTGGGCCAGGCCAAGCTGGTCACAGACTGACCGGCGGGCGGCAGGCGGCACGCCGCCAGCTGCAAGCCGCAAGCTGCAAGCCGCAAGGAAAAGCCAAT CTGCCTTTTCTTGCAGCTTGAAGCTTGCAGCTTGCCGCTTTTGTCATGAACTGCCGGTGCCGGCCATGTACAATGCCGGTTTTGCCCGCAGCGGCATGAT GCCGCATCAGGCCGACGGCCATACAAGCAGAATGACGGGTGCTGGGCGCATGCGCTTGCCCAGGAAACATCTCAGACCATTAGCGATTTTCGAGAGACGG
DNA Sequence for Gene
>PPA02S_RS12390
ATGAATATCACCAACCTTGCCAAACGACTTTGCCTGCCCGTACTGCTGATGATCACGCCGGCCGCCTTCGCGGCCGAGCAGATGACCCCGGCACCACCCC AGTTGGCAGCCAAGTCCTATGTACTCATGGACGCGTCCAGCGGCAACGTGCTGGTCGAGAACAACGGTGACGAGCGCCTGCCGCCAGCCAGCCTGACCAA GCTGATGACCGCCTACATCGCCACCCTGGACATCCGTCGTGGCCAAATTGGTGAAAACGACCCCGTTACCGTCAGCGAGAACGCCTGGCGTACCGGTGGT TCGCGCATGTTCATCAAGGTGGGCAGCCAGGTCACCGTCAGCGACCTGCTGCACGGCATCATCATTCAGTCGGGCAACGACGCGTCTGTGGCCCTGTCCG AGCACATCGCCGGCAGCGAAGATGCCTTCGCCGACATGATGAACAAGACGGCTGCCGACCTGGGCATGACCAACAGCCACTTCATGAACCCCACCGGCCT GCCGAACCCAGAGCACTATTCCTCTGCCCACGACATGGCGACCCTGGCCCGTGCGATCATCAACGTCGACCCGGCCCACTACGCCATATACTCGCAAAAA GAGTTCTTCTGGAACAACATCAAGCAGCCTAACCGCAACCTGCTGCTGTGGCGCGACAAGACGGTCGACGGCCTGAAAACCGGCCACACCGAGGAAGCCG GCTACTGCATGGTGGCCTCCGCCGTACGTGACGGCCAGCGCCTGATTGCCGTGGTGTTCGGTACCAACAGCGAGCAGTCCCGCGCTGCTGAAACCCAGAA GCTGCTGACCTACGGCTTCCGCTTCTTCGAAACCCAGACCTTCTACCAGAAGGGTACCGAACTGGCCAAGGCCCCGGTGTGGAAGGGTGCTACCAGCGAA GTGAAGGCCGGCCTGGCAGAAGACCTGACCATGACCATGCCTAAAGGCCAGCTCAAGCGCCTGCAGGCTTCGATGACCATGAACCCGCAGCTGACTGCCC CCATCGCCAAAGGCGACGTGATTGGTAAGGTCGAAGTCAAACTGGACGACAAAGTGGTTCACAGCGCCGACCTGATCGCCCTCGATGGCGTCGAGGAAGG TGGTATCTTCCGCCGTATGTGGGATAGCATCCGCCTATTCTTCTTCGGGTTGTTCAACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TACGTGACCTGCACGCCCCCGCGCAGCCGCGGGGGCGTTGTTGTTGCCACGGCTTGTGAGGCCGTTTCCGCCATGAGCGAACCAGACGTCAAATCCCATA AAATCGAATTCCCCTGCGCCGATTACCCGATCAAGGTCATTGGCGACACCGTTGTCGGCTTCAAGGACACCGTGATCGAAATCCTCAGCAAGTACGCCAA GGTCGATCTGTCCACGTTGGCCGAGCGGCAAAGCAAGGAAGGCAAGTACACCACCGTGCAGTTGCACATCGTGGCGGAAAGCGAAAACCAGCTGCACGAT ATCAACAGCGCCTTGCGCGCGACCGGCATCGTGAAAATGGTACTGTGATGCCCGGCTGTCTCGGTTTTCGCGAGCTTGGCCTGCAGCCCTATGAACCGGT GCTGGAGGCCATGCGGCGCTTTACCGAGCAGCGCGGCCCGGATACTCAGGACGAAGTCTGGCTGGTCGAGCACCCAGCGGTGTTCACCCAGGGCCAGGCT
Amino Acid Sequence
>D-alanyl-D-alanine carboxypeptidase
MNITNLAKRLCLPVLLMITPAAFAAEQMTPAPPQLAAKSYVLMDASSGNVLVENNGDERLPPASLTKLMTAYIATLDIRRGQIGENDPVTVSENAWRTGG SRMFIKVGSQVTVSDLLHGIIIQSGNDASVALSEHIAGSEDAFADMMNKTAADLGMTNSHFMNPTGLPNPEHYSSAHDMATLARAIINVDPAHYAIYSQK EFFWNNIKQPNRNLLLWRDKTVDGLKTGHTEEAGYCMVASAVRDGQRLIAVVFGTNSEQSRAAETQKLLTYGFRFFETQTFYQKGTELAKAPVWKGATSE VKAGLAEDLTMTMPKGQLKRLQASMTMNPQLTAPIAKGDVIGKVEVKLDDKVVHSADLIALDGVEEGGIFRRMWDSIRLFFFGLFN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site