Pseudomonas parafulva NBRC 16636 = DSM 17004, PPA02S_RS14545

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas parafulva NBRC 16636 = DSM 17004 strain NBRC 16636, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCGGCCGACCAGGTCATCGCGCTGATCAAGGCCGAGCAGGCCAAGGGCGTCAGCCTGTCACGCATCTTCCTGGCCGGTTTCTCCCAGGGCGGCGCGGTG GTGCTGCACACCGCCTATATAAAGTGGCAGGAGGCCCTGGGCGGGGTGCTGGCACTGTCTACCTACGCGCCAACGTTCAGTGAAGGGCATCAGCTCAGTG CCTGCCAGCAGCGCACCCCGGCGCTGTGCCTGCACGGCGTGCATGACCCGGTGGTGATCCCGTCGATGGGCCGTACCGCCTTTGAATACCTCAATACCTG GGGCATTGCCGCAACCTGGCAGGAGTACCCCATGGAGCACGAGGTGGTGGTCGAGGAGCTGAACGACATCTACCACTGGCTGGCCAGGCAACTTCAATAA CCCAAGCCGCCTGTAGTTGTGCGTCAGTTCCACTACGCCGCGCAGGGTTCTTGCATTACACTGCCCGGCGTACATTCCTTAACCAGTTGACGAGACGACC
DNA Sequence for Gene
>PPA02S_RS14545
GTGCTCAAGGCACTTAAAAAAATATTCGGCAAGGGAGACGACGCCCCGCAGGCTGTCGCGCCTGCTGCCAGCGTTGCATCGCCCGCGCCCGTTTCCGAGG CCCGTCCAGTAACCGCACCCAAGCCACCGCGCGCCAAACCTGCCCCCAAGGCCAGCCAGCCGGTGGCAACCGCGCCTGCGGCGGCAACGCCGGCAAAAGA AAAACCGCGCCGCGAGCGCAAGCCCAAGCCGCAGGCCAGCCTGTGGAAGCCGGAAGACTTCGTGGTCGAGCCGCAGGAAGGCAAAACCCGCTTCCATGAC TTCAAGCTGTCCAACGAACTGATGCACGCCATCCACGACCTGGGCTTCCCGTACTGCACGCCGATCCAGGCACAGGTGCTGGGTTACACCCTGCGTGGGC AGGACGCGATCGGCAGGGCCCAGACGGGTACGGGCAAGACGGCAGCGTTTCTGATTTCGATCATTTCCCAGTTGCAGCAGACCCCACCGCCCAAAGAGCG CTACATGGGCGAACCCCGTGCGCTGATCATCGCGCCCACCCGCGAGCTGGTGGTACAGATCGCCAAGGACGCTGCGGCCCTCACCAAGTACACCGGCCTG AACGTGATGAGCTTCGTCGGTGGCATGGACTTCGACAAGCAACTGAAGGCGCTGGAAGCCCGGCACTGCGACATTCTGGTGGCCACCCCAGGCCGGCTGC TGGACTTCAACCAGCGCGGCGAGGTGCACCTGGACATGGTCGAGGTGATGGTGCTGGACGAAGCGGACCGCATGCTGGACATGGGCTTCATCCCCCAGGT ACGGCAGATCATCCGCCAGACCCCGCCCAAGAGCGAACGCCAGACCTTGCTGTTCTCGGCCACCTTCACCGACGACGTGATGAACCTGGCCAAGCAGTGG ACGACCGACCCGGCCATCGTCGAAATCGAGCCCGAGAACGTTGCCAGCGAAACGGTCGAGCAGCATGTGTATGCGGTGGCGGGCAGCGACAAGTACAAGC TGCTGTACAACCTGGTTACCCAACACCAGTGGGAACGGGTGATGGTATTCGCCAACCGCAAGGACGAAGTGCGGCGCATCGAGGAAAAACTGGTGCGTGA CGGCATCAATGCCGCGCAGCTTTCAGGCGACGTGCCCCAGCACAAGCGTATCCGCACGCTGGAAAACTTCCGTGAAGGGCGCATCACCGTGCTGGTTGCC ACCGATGTGGCCGGGCGGGGTATTCACATCGACGGTATCAGCCACGTGATCAACTTCACCTTGCCCGAAGACCCGGACGACTACGTGCACCGTATCGGCC GTACTGGCCGTGCAGGCACCAGCGGTGTGTCGATCAGCTTTGCCGGGGAGGATGACTCGTATCAGTTGCCCGCGATCGAAGAACTGCTGGGCCGCAAGAT CAAGTGCGAGATGCCGCCAGATGAACTGCTGCAGCCCGTGCCGCGCAAGCATCACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCTGTACCGGCCTCTTCGCGGGTAAATCGGATCGCCGCACCGCCGCTCCCACAGGTAGGGCGCCTGCTCCAGCAGATAAGGTGCATGACTAGGTGGGAGC AACTGTCTTACACAAGATCTGAAAGTTGGCTCAATCACTGTGGGAGCGGGTTTACCCGCGAACCGGGGCATAGCCCCGGCCACCCAACACAGGGCTACCA GCGCCCCGCCGCATCCTGGTCACTCTGCCTGCCCTCGACCCAGTGCGGGCCGTCCCCGGTCATTTCCTTCTTCCAGAACGGCGCCCGGGTTTTCAGGTAA TCCATGATGAAGTTGCAGGCATCGAACGCGGCCTGCCGGTGAGCACTGGCCACCCCCACGAACACAATGGGCTCGCCCGGCTCCAGCGCCCCGATGCGGT GCAGCACTTCGACCTTCAACAGCGGCCAGCGCTGCTGGGCCTCGGCGGCAATCTTGGCCAGGGCCTTCTCGGTCATGCCCGGGTAATGTTCAAGAAACAT
Amino Acid Sequence
>ATP-dependent RNA helicase RhlB
MLKALKKIFGKGDDAPQAVAPAASVASPAPVSEARPVTAPKPPRAKPAPKASQPVATAPAAATPAKEKPRRERKPKPQASLWKPEDFVVEPQEGKTRFHD FKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGL NVMSFVGGMDFDKQLKALEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTDDVMNLAKQW TTDPAIVEIEPENVASETVEQHVYAVAGSDKYKLLYNLVTQHQWERVMVFANRKDEVRRIEEKLVRDGINAAQLSGDVPQHKRIRTLENFREGRITVLVA TDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGTSGVSISFAGEDDSYQLPAIEELLGRKIKCEMPPDELLQPVPRKHH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site