Pseudomonas parafulva NBRC 16636 = DSM 17004, PPA02S_RS18110

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas parafulva NBRC 16636 = DSM 17004 strain NBRC 16636, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCCTTGCCCAGGTGGGTGAACACCACCACGTAGTCGATACAGGGCGTCAGCAGTACCAGCAATGCGCCTACCAGCAGTGCTGGGTGGTGCACCAGGCCA CGGGTAATGGTCGCGACCAGCAACGGCACCAGAATGAAATTGGCCAGCAGCAAGGCAGCCATGAAGCGGCGATTACTCAGGCCCTCGCGCAGGCTCAGAA ACGGAATCTGCAGGAACATGGCGTACATCAGTACGGCAATAGCGGGGGTGGCCAGTGCTTCCAGGTGACGCGCGGTGGTGCTGGACAGCAAGCCAAACAC GATGGCCGCCAGCACGGCGGCGAAGTAGATCAGGGTCTGGTGGGTTTCGAGTTGGTCTCTGGTCAAGGGGGCTGCCTGGAAAGGTTGTAACGAGTGTGCA CAGCTGCTGCAGGCATCGCTTTTAAGATTCGTCTGAGAGCATGCTTGGTAGAGCTGCTTCATCCTGCCTGATTGTATAAAACAAGCACAGGAAGTTTTGA
DNA Sequence for Gene
>PPA02S_RS18110
ATGAACGTTTGCGCCGCCGTTCTGGCGATCACGGCAGTTGCTATTACACCCAGTATTGCGTTTGCGGCCAACACCATAAACTTCAACGGTGAGGTCACTT CGCAAACCTGCTCGGCGGTGATCAATGGCCTTGCTGATCCAACGGTACTGCTTGACAGCGTTTCTGTTGACGCGCTCCACGGCAACGCTGGCAGTGTGGC AGGCGAAACGCCGTTCAGCCTGCGCCTGACGGGGTGCGTAGCATCGACAACAGGTGACCAGCACTTCGCCACCGTTTTTCAGGCTGTCAATGCAACCCCC GCGGGGAATCTCGCCAATACCGCAGTGGGCGGTGCCACTGGCGTGGCACTCCAGCTGCTCGACAGGGCTGGCGGCAACCGGTTGAACCTCGCTGGAAATG CAGCGGTGAGGGCGGGCGACATCGTTTTGCCCTCTGGCCAGACAACCGTCAGTTACGACTACGCCGTTCGCTATGTTGCTGAGGCGGTCAGTGTGACGCC CGGTCCAGTGCTCGGCTCTGTGACCTACACCGTACGCTACGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCATGGCTACCTGTTAGCGATGGGGCGCTCCATCTGGCGGTTTGCCAGGCACTGGGTTGACCAGCGCGGCCTGCGCCGTGCCTGGCGCCAGTTTCTGGC CCTTTTGCGCGCGCCGACACCAGCGCCCGCCGCGTTGGCGTTGTTGCTGGTGTGCGGTTGGACGGTGCCGGCCCAGGGCAGCGTGGTGATCGCCGGTACC CGCGTCATCTACCCCGGCCAGGCGCGGGAGAAAACCCTGCAGGTCACCAACCAGGACAATTTCGCCAATGTGGTTCAGGCCTGGGTTGATATCAACGACC CAGCCTCCACGCCAGAAACGGCAGATGCGCCGTTCCTGGCCAACCCCGCAGTGTCGCGACTGGCGCCTGGCCACGGCCAGACGCTGCGTATCATCTACAC CGGCGCGGGTCTGCCCCAGGACCGTGAGTCGTTGTTCCACCTCAATGTCCTGCAAATTCCACCGCTGAATGTTGCCCACGGCGGGCGGGACCAGATGCTG
Amino Acid Sequence
>fimbrial protein
MNVCAAVLAITAVAITPSIAFAANTINFNGEVTSQTCSAVINGLADPTVLLDSVSVDALHGNAGSVAGETPFSLRLTGCVASTTGDQHFATVFQAVNATP AGNLANTAVGGATGVALQLLDRAGGNRLNLAGNAAVRAGDIVLPSGQTTVSYDYAVRYVAEAVSVTPGPVLGSVTYTVRYE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site