Pseudomonas oryzihabitans RIT370, UM91_RS09135

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas oryzihabitans strain RIT370 contig7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCAGGCCAAGAGCCCCTACGCCCTGGTCAGCCACAAGCTGCGCGAGGAAGACGGCACCTCCACCGTCGACATCAAGGTCGCCGTCGAAGGTCGCACCGAG CATTGGCACGGCACCGGCAAGGGTCCGCTGGAAGCCCTGGTGGCGAGCCTGCCGGAAGCGGTGGAGATCATGGACTACCACGAGCACTCCATCGGCGCCG GCGCCAACGCCAAGGCCGCTTCCTACATCGAGGTCCGCCTGGAAGGTCAGCGTCCGCTGCATGGCATCGGCATCGACGAGAACATCACCACCGCCAGCTT CCGCGCCCTGCTCAGCGCCCTGAATCGCGCGGTGACCCAGGCCCAGGCCAAGGCCGCCTGAAACTGACATTCGTCAAACCAAAGGGAATACCTGTCGGTG TTCCCTTTTTTTATGGCGAATCAGCGGAGATACTCCCCGCTTCCTAGGGATCGTCTCGCCTGCCCGCTTCGGCCAGCCGGGCAGCTTGTCTGGATAGGCA
DNA Sequence for Gene
>UM91_RS09135
ATGACCTTCACTCTGTCGCGAAACACCTCTCTGCTGCGTGACGCCACCGCGCTGGCGCTGCTGTTCCTGATCAGTTCGGTCCTGTGCATCCTCTTCACCC GCCAGGCGTCCTCCACCGTGGCCACCCTCTGGTTGCCCAATGGCCTGGCGATCGCCTGGCTGCTGCGCTCGGCGCCCCGGCGCTGGCCGCTGCAACTGCT GGCGGTCTGGCTGGCCGGCGCCCTGGCCGAATTGCCCTTCAGTGGGGACCCGGCCATCGGCGCGCTCTATTCCCTACCCAATCTGGCCGAGATCCTGTTC GGCGCCTGGCTGCTGCATGGCCGCATCCTCCATCCCGAACGCAATGTCGCGGCCATGGGCCGACTGCTGTTCTACGGGGTGCTGGTGACGCCCCTGGCCG GTACCGCCCTGGGCACCCTGATCGCCGCTCAGCAGGGCAATCCCGAGCTGCTGCGGGTGGCCCTGCACTGGTACCTCGGCGACGCCCTCGGCCTGCTGGT GATGATGCCGCTGGCCTTTCTCGGCCGCCCGCTGCAGTGGCGGCAATTCAGTCGTCAGGGTGCCCGTGAGTTCATCGTCCTGCTGCTGATCAGCCCCGTG CTGGTGCTCGGCCTGCTGGCCTATGTGCCCTACCCCTTCGTCTACGTCTCCACCCTGCTGCTGCTGATGACCCTAAGGCTCACTGCCCTGGGTACCGCGG TGGTCGGCGGCCTGAACATCCTGATCTTCACCTACCTGGTGGCCCACGGTTATCTGCTCGGCGTTCGCGGCGCCACCCTGGTGCAGGAAGCCCTGACCTA CATTCCCGTGGCCCTGATGCAGATTCCCCCACTGTTGCTGGCCGCCGCCGTGCAGCAGAGCCGTCACCACAACCAGCGCCTGGCGCGCAACGAGGCACGC TTTCGCCATGCCCTGAGCGCCGCGCCCTATGGCATGGCGCTGCTGTCGGTGGAGGGCCGCCTGAGTCAGGTGAATGCCGCCCTGGAGGCCATGCTCGGCT ATCCGCGCCACAGCCTCGACGGCCGGTCGCTCAAGGAGTTGATCGCCGATGGCGAAGAACCCCTGACGATCGAGGAAGGCGAGCAGACCCGCCGTCTGCT GCACCGCGACGGCCAGGGACTGTGGATGCAACTGGCGCTGTCGCCCGACCATGATGATGGCGACCTGCTCACCGGCTATCTGCTGCAGGCCCGCGACATC GACGCCCAGCGCCGGGCCGAGGCGACCAACGCCCGGCTCCGCGAGCGGCTGCAACTGGCCATTCGCGCCAGCAACGTCGGCATCTGGGAATGGGATACCC GCAGTCCGGGCTTCAATGCCGATGCGCGGCTGAGAGATCTCTACGGCATTGCCCCCGACAATCTCAGCCGGGACATGGACTTCTGGCTCACCTTCATCCA CCCGGACGACAAGGCGCGTTCGCTGGAGGTGTTCGACAAGGTCGCCAGCGAGTCGATGTTCTACACCTTCAACTTCCGCATCAACCGCGGCGGCCCCGGC GGCGAGGTGCGCCATATCCGCTCCGAGCTGATCTCGGTGGTCGAGGCCGACGGCCATGTACGCCTGGTCGGCAGCAACAGCGACGTCACCGAGCACCACC AGCTGACCACGGCGCTCTACGAGGAAAAGGAACGGCTGCAGGTCACCCTGGCCTCCATCGCCGACGCCGTGCTGACCACCGACATGGATGGGCGCATCCT CTTTCTCAATCCGGTCGCCGAGCAGCTCACCGGCTGGTCGCTGGCGGATGCCCGGGGCCGGCCCCACGAAGAGGTGTTTCTCATCCACGACAGCCAGAGC GACGAGGTCCTGCCTAGTCCGGTGACCCGCTGCCTGCGCGAGCAGACCATCACCTCCCTGGACGAGGGCGCGGTACTGCTCAGCCGCCAGGGTGACAGGC ACGAGGTGCAGGATTCGGCCGCGCCAGTGCGTACGGTGGATGGCCGCATCATCGGCGCGGTGCTGGTGTTCCAGAATGTCACCCATGCCCGCAATCTGCA GCGCGAGCTGAGCTACAACGCCTCCCACGACGCCCTGACTGGCCTCTACAACCGCCTGAAGTTCGAGCAGGAGCTGGACGCCGCCTGGCAGCAGGCCCAG GCCGGGACCGTCCAGCACGCGCTGTGCTTCATCGACCTCGATCGCTTCAAGGTGGTCAACGACTCCGCCGGCCATGCCGCCGGGGATCTGCTGCTGCGCG AACTGGGCACTCTGCTGCGGGACTCCCTGCGCGGCTCGGATGCCGTGGCGCGGATCGGCGGCGACGAATTCGCCCTGCTGCTGCGCGACTGCGATCTGGT GCAGGCCGAGGCCGTCGCCGAAAAGCTCATCGCCAGCATCGGCGCCGTGCGCTTCAACTGGCAGAGCCGGATCTACGACGTCGGCGCCAGTGCCGGCATC GTCGCCATCACCGCCGAAACCCGGAGCCCGGCCGAATTGATGAGCCAGGCCGACGTGGCCTGCTATACCGCCAAGCACGCCGGGCGCAATCGCGCGGCGC TCTATCGCGCCGGCAGCGAGGACGTCGAGCGCCAGCACCGCGAGATCCTCATGGCCAGCGGCCTGCGCGAGGCCCTGGAGCAGCATCGCTTCGAACTGCA CGCCCAGACCATCGTCCCCACCCGGAGCCGTGGCGGCGCGGCGCAGCATGTCGAGTTGCTGCTGCGCCTGCGCGATGTCCAGGGCCAGCTGATCTCGCCA GCCACCTTCATCCCGGCCGCCGAGCGTTTCGGTCTGATGAGCAGCATCGACCGCTGGGTGGTGCGTCAGGTGCTGGTGGAACTGGTGCCCTGGCTGCAGG AGCGACCCGGGCTGCACGTGGGCATCAATCTCTCGGGCAACAGCCTGAGCGATCCCGACTTCCTGCCCGAATTGCTGGAGCTGATCGCCGCCTCGCCGCT GGATCCGCAGCGCCTGCTCTTCGAGCTGACCGAGACCGCAGTGATCAACAAGCTCTCGGTGGCCTCGGCGCTCATCAGCCAGGTCCGCGAACGCGGCTGC CGCATCGCCCTGGATGATTTTGGCGCCGGCCTCAGCTCCTTCGCCTACCTCAAGCACTTCCGCGTCGACTACGTGAAGATCGACGGTAGCTTCATCCGCA GCCTCGACCAGGATCCGCTGGATCGCGCCATCGTCGAGTCCATCAACCAGGTCGCCCACCACCTCGGCGCCGAGACCATCGCCGAATTCGTCGAGTCCCA GGCCACCTTCGAATTGCTCGGCACCATCGGCGTGGACTACGCCCAGGGCTATGCCCTCGGCAAACCCCTCCCCCTGCAGGAGTGGCCCGGGCCTACGCGC CTCGAACCTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGCGGCCATCGGTCGTAACCTGCATGACTCCCCCAACCGGATGAGGATTCCATGCACACTCGTACCCTTGGCCACTCAGATCTCCAGGTGCCCCCGCT CTGCTTTGGTGGCAATGTCTTTGGCTGGACCCTGGACGAAGCCCAGTCCTTTCGCATGCTGGATGCCCTGCTCGAGGCGGGCCTGACCTTCATCGACACC GCCGACGTCTATTCGCGCTGGGCACCGGGCAACCGCGGGGGCGAATCCGAGACCCTGCTGGGCAAGTGGTTCGCCCGCAGCGGCAAGCGCGACCAGGTGA TCCTGGCCACCAAGCTGGGCATGGACATGGGTGAGGGTCGCAAGGGCCTCAAGGCCAGCTATGTGCAGCAGGCAGTGGAAGCCTCGCTCAAGCGCCTGCA GACCGATCGCATCGACCTCTATCAGGCGCACTGCGACGACGAGGACACCCCGCTGGAGGAAACCCTGGGCGCCTTCGCGCGGCTGGTGGAACAGGGCAAG
Amino Acid Sequence
>diguanylate cyclase
MTFTLSRNTSLLRDATALALLFLISSVLCILFTRQASSTVATLWLPNGLAIAWLLRSAPRRWPLQLLAVWLAGALAELPFSGDPAIGALYSLPNLAEILF GAWLLHGRILHPERNVAAMGRLLFYGVLVTPLAGTALGTLIAAQQGNPELLRVALHWYLGDALGLLVMMPLAFLGRPLQWRQFSRQGAREFIVLLLISPV LVLGLLAYVPYPFVYVSTLLLLMTLRLTALGTAVVGGLNILIFTYLVAHGYLLGVRGATLVQEALTYIPVALMQIPPLLLAAAVQQSRHHNQRLARNEAR FRHALSAAPYGMALLSVEGRLSQVNAALEAMLGYPRHSLDGRSLKELIADGEEPLTIEEGEQTRRLLHRDGQGLWMQLALSPDHDDGDLLTGYLLQARDI DAQRRAEATNARLRERLQLAIRASNVGIWEWDTRSPGFNADARLRDLYGIAPDNLSRDMDFWLTFIHPDDKARSLEVFDKVASESMFYTFNFRINRGGPG GEVRHIRSELISVVEADGHVRLVGSNSDVTEHHQLTTALYEEKERLQVTLASIADAVLTTDMDGRILFLNPVAEQLTGWSLADARGRPHEEVFLIHDSQS DEVLPSPVTRCLREQTITSLDEGAVLLSRQGDRHEVQDSAAPVRTVDGRIIGAVLVFQNVTHARNLQRELSYNASHDALTGLYNRLKFEQELDAAWQQAQ AGTVQHALCFIDLDRFKVVNDSAGHAAGDLLLRELGTLLRDSLRGSDAVARIGGDEFALLLRDCDLVQAEAVAEKLIASIGAVRFNWQSRIYDVGASAGI VAITAETRSPAELMSQADVACYTAKHAGRNRAALYRAGSEDVERQHREILMASGLREALEQHRFELHAQTIVPTRSRGGAAQHVELLLRLRDVQGQLISP ATFIPAAERFGLMSSIDRWVVRQVLVELVPWLQERPGLHVGINLSGNSLSDPDFLPELLELIAASPLDPQRLLFELTETAVINKLSVASALISQVRERGC RIALDDFGAGLSSFAYLKHFRVDYVKIDGSFIRSLDQDPLDRAIVESINQVAHHLGAETIAEFVESQATFELLGTIGVDYAQGYALGKPLPLQEWPGPTR LEP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site