Pseudomonas oryzihabitans RIT370, UM91_RS08295

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas oryzihabitans strain RIT370 contig6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATGATCGTGTTGATGCTGCAGATCTCTTCCAAGGGTCTGACCACCACCAACGTGACCCGCCTGTCGTGCCTGAGCCTGTTCTGGCACTTCCTGGACATC ATCTGGATCTTCGTCTTCACCATCGTCTATCTGATGGGGGTGCTGTAATGGCGCACGACCATAACGCCCACGGGCATACCGCCGAGAGCCATGGCACTTT CAAGAGCTACATGGTCGGCTTCATCCTGTCGGTCATCCTGACGGTCATTCCCTTCGGCCTGGTGATGTTTCCCACCTTCTCCAAGGGCGCGACCCTGGCG ATCGTGGTGATCATGGCGGTGGTACAGCTGCTGGTGCACCTGTACTTCTTCCTGCACCTGAACACCTCCGAAGAGCAGCGTTGGAACGTGATCTCCTTTG GTTTCACCGTGGTCATCGTCGGTATCCTGGTCGTGGGATCCCTGTGGATCATGTACCACATGCACCAGAACATGATGATCCACTGAACCGGGCCGACGTG
DNA Sequence for Gene
>UM91_RS08295
ATGATCAAGAAGTACCTTCTCGTGACGAAGCCGGGCATCATCTTCGGCAACCTGATCTCGGTTGCCGGCGGGTTCTTCCTGGCTTCCAAAGGGAGCATCG ACCCGCTGTTGCTGCTGGCGACGGCTATCGGGGTGTCGTTGGTCATTGCTTCCGGCTGTGTGTTCAACAACGTGATCGATATGGACATCGATCAGAAGAT GGAAAGAACCCGCAATCGTGCGCTGGTCCAGGGCACGATCTCCTCGAAGGTGGCGCTGGCCTATGCCACCCTCCTCGGCCTGGCCGGGGTGGGTCTGCTG TACGTGGCGACCAATGCGGTCGCCACCGCCTTCGCGGTGATGGGTTTCGTGGTGTACGTAGGGCTCTACAGCCTCTGGCTGAAGCGCACCTCGGTATACG GCACCCTGGTCGGCAGCCTGTCCGGTGCCGCACCGCCGGTGATCGGCTACTGCGCCGCCAGCGGCCAGTTCGACAGTGGCGCTGCGGTGCTGCTGCTGAT CTTCTGCCTCTGGCAGATGCCGCACTCCTACGCCATTGCCATCTTCCGTCTCAAGGACTACACCGCGGCCTCGATTCCGGTTCTGCCGGTGGCCAAGGGG ATCTCGGTGACCAAGCGTCACATCGTCTGGTACACCGTGGCCTTCATGGCCGCCACCCTGCTGCTGACCGTGCTCGGCTACGCCGGCTACGTCTATCTGG CAGTGGCCGCCGTGATCGGGGCCTGGTGGCTACGCCTGGCCTTCATGGGTTATCAGGCCGAGAACGATGTCCAGTGGGCACGCAAGCTGTTCGGGTTCTC CATCATCGCCATCACCGCCCTGAGCGTCATGATGTCGGTGGACTTCCAGATCCCGGGCGACGTGCTGCTGACCTACGCACGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GACGCACCGTTCCATGAAAAAGCCCGGCCCAGTGCCGGGCTTTTTCATGCCTGCGTGAAAGCTGCTGCCGCTAGTCCTGGTTGGTGATGACGCGCCAGGT CTGGCGGCGACTGGCGGGCAGGTCACCCCGCAAGCCATTCGGCGACTTGCCGTCGCTGCCATAGATCGCCGCATCCGCCAGGGTCCCTTCCATGCTGAAA GTGCCATCACCGTAGACGAAGAGCACGATCCCACCGAGCAGACCATCGAGCTGGATACGCCCATAGACCGTATCCGTCCCCAGGTTGAACAGGCCGCTGT TGTTGCCGCCAGTGTAGGGATCCAGAGCATAGAGGTAGGTGGTGACCCCAGCGGTACAGGCGTCGGTGCTGGGAATCAGCGAACTCATCAGCAGGGTGCC GCTGAACAGTTGGGGCTTGTTGATTACCAATTCGCCATTCAAGGGCAGGTTCAGATACCAGCCCTGTTTGCCATTGGTCGCCGTAGTGGCGTCATAGCTG
Amino Acid Sequence
>protoheme IX farnesyltransferase
MIKKYLLVTKPGIIFGNLISVAGGFFLASKGSIDPLLLLATAIGVSLVIASGCVFNNVIDMDIDQKMERTRNRALVQGTISSKVALAYATLLGLAGVGLL YVATNAVATAFAVMGFVVYVGLYSLWLKRTSVYGTLVGSLSGAAPPVIGYCAASGQFDSGAAVLLLIFCLWQMPHSYAIAIFRLKDYTAASIPVLPVAKG ISVTKRHIVWYTVAFMAATLLLTVLGYAGYVYLAVAAVIGAWWLRLAFMGYQAENDVQWARKLFGFSIIAITALSVMMSVDFQIPGDVLLTYAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site