Pseudomonas oryzihabitans RIT370, UM91_RS05720

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas oryzihabitans strain RIT370 contig4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGGCGACCGCCGCGGAGCTGGGCGAGTTGTTCCTGACCAATGCCGTGGCGCCGCTGCGGCTGCTGGAGGCCCTGGCGCCGCGGATGGCTGCGGCGGGAG TGGCGGCCTGCTTGGGTTCGCAGATGGGCAGCGTCAGCCTGGCACGGGCCGCCGACATGCCGCTGTATGGCGCCAGCAAGGCGGCGCTCAATAGCCTGCT GCAAAGCTGGGTCGCAGGGCAGCAACCGGCCTTCGCCGTGCTTGCGCTGCACCCAGGTTGGGTGCGTACCGCCTTGGGCGGGGTAGGCGCGCCGGTCGAG GTGGCCGCTAGCGTTGCCGGTCTGGTAGCGACGATCGAGGCGCGGGCCGGCCAGCGCGGCTGTGCCTTTCTCGATTACCAGGGCCAGGCCCTGCCCTGGT GAGCAGGGGGCCGGATCGCTCCGTGCGGCTGAGCGATCCGGCCCTTGTCCGACCTCTGTCGAGGATCGAAGATGAGTCCATCATCCTGGAGAGCCCGCCC
DNA Sequence for Gene
>UM91_RS05720
ATGCGCATCGACGAGCACACCTTTCTGGTAACCGGCGCCGGATCCGGCCTTGGCGCCGCCACCGCCGCGGCGCTGATCGCGGCAGGCGCCCGGGTGGCAC TGCTGGATCTGCAGGCCGACGCCGTGCAGGCCCAGGCCGAACGCCTCGGCGACCGGGCCCTGGCGCTCGCCGTGGACGTGACCGATGCCGAGGCCCTGAG CGCTGCCATGGATACCCTCCTGGCCCGCTGGGGCGGTCTGCAGGGGGCAATCAACTGCGCCGGCATCGTTGGCGGCGCACGCATCCTCGGGCGCAACGGC CCCCACGATCTCGCCGCCTTCGCGCGCATCATCAACGTCAACCTGGTGGGCAGCTTCAATGTGCTGCGCCTGGCCGCCGCGGCCATGGCCCAGGGCGAGG CCGATGCCGGCGGCGAACGCGGCGTGATCATCAATACTGCGTCCATCGCCGCCTTCGACGGCCAGATCGGCCAGGCCGCCTATGCCGCCTCCAAGGGCGG CGTCGCCGCGCTCACCCTGCCGGCGGCGCGCGAACTGGCCGGGCAGGGCATCCGGGTCATGACCATAGCGCCGGGCGTCTTCGAGACGCCCATGATGGCC GGCATGACCCCCGAGGTGCGCGAGGCCCTGGCCGCCAACGTGCCCTTTCCGCCGCGCCTCGGTCGCGGCGAGGAATTCGCCACCCTGGTCCGCCACATCA TCGAGAATCCCATGCTCAACGGCGAGGTGATCCGTCTCGACGGTGCGCTGCGCATGGCCCCGCGCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCCTGTACGAAAAGTCGCCGAGCGATGGTCAGGCGAGGCGAAAAGCGCTGAGGAAGCGGAGTTTACGAGTGGTAAATGAGCATTCCGAAGCGCTTTTCA ACGAAGCATCACCGAGTGTAGGCACTTTTCGTAAGGGCCTAGGAGAGTTGTCATGAACGATCCCATTGTTATCGTCGCCGCCGCTCGCACCCCCATGGGC GCCCTGGGCGGCGAACTGGCGGCGCTGTCGGCGCCACAGCTGGGCAGCGCCGTGATCCGCGCCGTGCTGGAGCGGGGCGGTTGGTCGCCGGAGCGGGTCG ACGAGGTGCTCATGGGCTGCGTGCTGCCCGCCGGCCTCGGCCAGGCACCGGCCCGCCAGGCGGCCCTTGGCGCCGGCCTGGACCAGAGCACGCGCTGTAC CACCCTGAACAAGATGTGCGGTTCGGGCATGCAGGCGGCCATCCTCGGCCATGACCTGCTGCGCGCCGGCAGTGCCGAGGTGGTGGTGGCGGGCGGCATG
Amino Acid Sequence
>3-hydroxy-2-methylbutyryl-CoA dehydrogenase
MRIDEHTFLVTGAGSGLGAATAAALIAAGARVALLDLQADAVQAQAERLGDRALALAVDVTDAEALSAAMDTLLARWGGLQGAINCAGIVGGARILGRNG PHDLAAFARIINVNLVGSFNVLRLAAAAMAQGEADAGGERGVIINTASIAAFDGQIGQAAYAASKGGVAALTLPAARELAGQGIRVMTIAPGVFETPMMA GMTPEVREALAANVPFPPRLGRGEEFATLVRHIIENPMLNGEVIRLDGALRMAPR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site