Pseudomonas oryzihabitans RIT370, UM91_RS21890
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas oryzihabitans strain RIT370 contig33, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTCTCGATCTGATCCGCCAGCTGCGCAACCAGGGCGCCACCCTGCCGATCCTCATCCTCACCGCCCGCGGCAGCTGGCAGGACAAGGTCGAGGGGCTCG GCGCCGGGGCGGACGACTATGTGGTCAAGCCCTTCCAGTTCGAAGAGCTGGAGGCGCGCCTCAACGTGCTGCTGCGCCGTTCGGCAGGTTTCGTCCAGCC GAGCATCCGCGCCGGTTCGCTCAAGCTCGACCTGGGCCGCCAGCAGGCCTTCAACGAAGAGCAGCCGCTGCAGCTGACCGCCTACGAATACCGCCTGCTG GAATACCTGATGCGCAACCACCAGCAGGTGATCACCAAGGAGCGGCTCATGGAGCAGCTCTACGACGATGACGGCGAGCACGACAGCAACGTCATCGAGG TGCTGGTGGGCCGCCTGCGGCGCAAGCTGGAGGCCAGCTGCCAGATGCAACCCATCGAAACGGTCCGGGGCCGCGGCTACCTGTTCACCGAGCGCTGCCA
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| DNA Sequence for Gene |
>UM91_RS21890
GTGATCCGTTCCTTTCGCGTGCGGCTGCTGCTCAGCGCGGCCCTGCTGGTCAGCGTCTGCCTGGCGCTGATCGTGCCGGCGATCCGCAACGCCTTCGACC GCACGGTGGAAAACTTCGTCGCCGCGCGGCTGGAGGCCAACGCCAACACCCTGATCGGTGCGGCGCGCGCCATCGACGGCCGGCTGGCGATGCCGGAGAT GATCGCCGAAGAGGTTTTCGACCGACCCGGCTCGCCGATCCTCGGCTATGTCTACGACCAGAACGGCCGCCTGCTCTGGCGCTCGCGCTCGGCGATCAAG GAGCGGCCCAACTACAAGCCGACCTTCGACGGCGGCGGGGTCAAGCTGGTCAAGGCCACCGACGACCAGGGGCAGGGCTTCTTCGTCTTCGATCGCGAGG TGCTGCTGGGCAATCCGCCGGTGGCCGGCTTCAGCGTGGTCACCATGCAGCCGGCCGAGGAATACGAGCGGCTGCGCGCCACCTTCCTGCACCAGGTGAT CCTCTGGCTGGTGGGGGTGCTGGGCGCCCTGCTGCTGCTGCTGGCGCTGGTCATGCAGTGGAGCCTGCGCCCGCTGCGCCGCCTCAGCCAGCAACTCGAT GCGGTGGAGACCGATCAGCGCGAGCTGCTCGACGAAAACAACGTGCCCAGCGAGATCAGCCGGCTGATCCGCTCGCTCAACCGCCTGCTCGATCATGAGC GGCTGCAGCGCGAGCGCTATCGCGACACCCTCGGCGATCTCGCCCACAGCCTCAAGACGCCGCTGGCGGTGCTGCAGGGGGTGACCGAGGAATTGCGCCG CCGACCGCAGCTGGACCAGGAGGTCGGCACCCTGCAGACCCAGATCGAGCGCATGAACCAGCAGGTGATGTACCAGCTGCAGCGGGCCACGCGCCAGGGT GGCGCGGTGCTCAGCCGGCCGCTGGAGCTGGCGCCGCTGCTGGAGTCGCTGTTCAGTACCCTGGACAAGGTCTATGCCGAGAAACGCGTCCAGGCGGAAA TGGACCTGCCGCCGAATCTGCGGGTGCAGGCCGAGGAAGCCGCCATGCTGGAGGTGTTCGGCAACCTGCTGGAAAACGCCTATCGGCTCTGCCTGACCCA GGTACGGGTCAGCGCCCGCCGGCACACCGAGCACTGGATCCTCGACATCGAGGACGACGGCCCGGGGATTCCCGCCGAGCGCCGCGAGAGCGTGCTGCGC CGCGGCATGCGCATGGACAGCCGGCACCCCGGGCAGGGCATCGGCCTGGCCGTGGTGCAGGACATCCTCGAAGGCTATCGCAGCAGCCTGACCATCGACG AATCGAGTCTGGGCGGCGCCCGCTTCCGCTTCCGCCTGCCAGCGGCCATTTCCCCGGAGCGGCCTTCCTTGGTGCACAATGGCGCCAGGACGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCATGGGTCATGGCTTGCGTCTGCTCCTGATAGTGAAATTCTGTCTGTAAGGACCCCGGCATGAGCCGCGACTGCCGTCATCTCGAATCCCTGTTGCAC CACGATATTCCCATCACCAAGGCCCTGGGCCTGGAAGTCCGCGACTGGAGCGAGCAGCGCCTGCAGCTGCATGCCCCGCTGGACGCCAACATCAACCACG CCAGCACCATGTTCGGCGGCAGCCTCTATTGCGTGGCCGTGCTGGCCGGCTGGGGCTGGCTGTACCTGCGCCTGCGCGAAGCCGGCATCGAGGAAGGCCA TATCCTCATCCAGGAAGGCCAGATCAGCTATCCGCGACCCATCACCACCGATGCCCTGGCCTATGGCGAGCCGCCCGAGGCGCGCGCCTGGGAACGCTTC GAGACCACCTTCCGCCGCCGCGGTCGTGCGCGTATCACCCTGCAGTCGCGCATCGTCAGCGAGAGCGGCGAGGATGGGGTACGTTTTACCGGTCAGTACG
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| Amino Acid Sequence |
>two-component sensor PhoQ
MIRSFRVRLLLSAALLVSVCLALIVPAIRNAFDRTVENFVAARLEANANTLIGAARAIDGRLAMPEMIAEEVFDRPGSPILGYVYDQNGRLLWRSRSAIK ERPNYKPTFDGGGVKLVKATDDQGQGFFVFDREVLLGNPPVAGFSVVTMQPAEEYERLRATFLHQVILWLVGVLGALLLLLALVMQWSLRPLRRLSQQLD AVETDQRELLDENNVPSEISRLIRSLNRLLDHERLQRERYRDTLGDLAHSLKTPLAVLQGVTEELRRRPQLDQEVGTLQTQIERMNQQVMYQLQRATRQG GAVLSRPLELAPLLESLFSTLDKVYAEKRVQAEMDLPPNLRVQAEEAAMLEVFGNLLENAYRLCLTQVRVSARRHTEHWILDIEDDGPGIPAERRESVLR RGMRMDSRHPGQGIGLAVVQDILEGYRSSLTIDESSLGGARFRFRLPAAISPERPSLVHNGART
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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