Pseudomonas oryzihabitans RIT370, UM91_RS05215

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas oryzihabitans strain RIT370 contig3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AACGCACGATGGTGGGCTCGCTGACGCCGACGTTGTGGGCGAGGTCGGCCATGGAGCTGTGCATGACGGCAGCCGGATCCACCATGACCTGCTCGGCGAC CTTGAGCTCCGACTTGCGCAGCAGGTGGCGGGATTGAGCAATGTGTTGCATGAGGTTCACAGGCGTATCTCGTCTAGCGGGCGGATGTAGTGCGTCGTAC TTATACTACATAACGGTCGCCAAGGCTCTTGGTCATTACGATTCAGCACGGTCTTTTTCGCGCCCGTATCGGCACTTGGTAGTCATCCGCACGACCGACT ACCTGAGCCCGAGCAGCTTTTGAACCGCTCTGCGCAAGGCCTTGCGCAGATTCCCGAGCGGTGGCGCACAGTTGCCCTGGCCCGCCCCTGTAGTGCTTTT GCAACCCACTGATCAGAAAGGAATTTTCGGTTCTGGCATAGCCCTTGTTAGCTCCTGGTATCCGGGCCATGAAGGCCCATCACCAGGCAAGGAGAGCACC
DNA Sequence for Gene
>UM91_RS05215
ATGCCAACCCCCGCGTACCTGTCCCTCGAAGGCACCAAGCAAGGCCTGATCACCGCCGGCACCTTTACCGAGGACTCGGTCGGCAACATCTTCCAGGAAG GTCACGAAGACCAGATACTGGTCCAGGCCTTCAACCATCAGGTGATCATTCCCCGCGATCCCCAGTCGGGTCAGCCCACCGGCCAGCGCGTGCACAAGCC GCTGATGATCACCAAGGTGTTCGACAAGGCGTCGCCGCTGATCTTCAACGCCCTCACCTCCGGCGAACGCCTCGGCAAGTGCCGCCTGGAGTGGTACCGC ACCTCGGCCACCGGCACCCAGGAGCACTACTTCACCATCGAACTGGAGGACGCCATCATCGTCGACGTCCAGTCGCGCATGCCCAACTGCCAGGACCCGA GCATGGCGCACTTCACCCACCTGGAAGACGTCTACTTCACCTACCGCAAGATCGTCTGGACCCACGAGGTCTCCGGCACCTCCGGTTCCGACGACTGGCG CTCGCCGATCGCCGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCGCCGACTGCAAGCATTACTCTGCCCCCCGCCAGCCCTGCTGGCCGGGGGTCCGCTGCCCTGCGCCACCCGCCTCGCCTCCCATCCGTCCGGTTTGGC GCTCCTTCTGCCGCATCGGTAGAATGCGGCGATGAACGACGACATTTCCCTGCTGCTCAATTCCCTCAACGATGCCCAGCGTCAGGCCGTGGCCGCGCCC CTGGGTCGCCAACTGGTCCTGGCCGGTGCCGGCTCGGGCAAGACCCGGGTGCTGGTGCACCGCATCGCCTGGCTGATCCAGGTCGAACGGGCCTCGCCGC ACTCCATCCTCTCGGTGACCTTCACCAACAAGGCCGCCGCCGAGATGCGCCACCGCATCGAGCAATTGCTCGGCATGAGTCCGCAGGGCATGTGGGTCGG CACCTTCCACGGCCTGGCCCACCGCCTGTTGCGCGCGCACTGGCAGGAAGCGGGGCTGTCGCAGAATTTCCAGATCCTCGACAGCGACGACCAGCAGCGC
Amino Acid Sequence
>hypothetical protein
MPTPAYLSLEGTKQGLITAGTFTEDSVGNIFQEGHEDQILVQAFNHQVIIPRDPQSGQPTGQRVHKPLMITKVFDKASPLIFNALTSGERLGKCRLEWYR TSATGTQEHYFTIELEDAIIVDVQSRMPNCQDPSMAHFTHLEDVYFTYRKIVWTHEVSGTSGSDDWRSPIAA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site