Pseudomonas oryzihabitans RIT370, UM91_RS04975

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas oryzihabitans strain RIT370 contig3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCCACGGCGCAACCGGATCATCAGCGGTCTCAGCCTGGGTACCCTGGTGGTGGAGGCCAGTCCTTCCAGTGGTTCGCTGATCACCGCGCGACTGGCCGCC GAGCAGGGCCGCGAGGTGTTCGCCCTGCCCGGCTCCATCCATCATCCCGGGGCCCGCGGCTGTCACCAGCTGATCCGCGAAGGCGCGCAGCTGGTGGAGG GCGTGGAACACATCCTCGAAGCCCTGCAGGGCTGGTGCAGCCTGGCCCCGCTCGCTACCACCGCGGCGGTCGAGGAGCATCCCCTGTTGCGCCAGCTGGC CGCCGGACCGCTCAACAGCGAAGAACTGGCGCGGCTCTGCGAGCTGTCGCTGCCGGAGGTGCTGGTCCAGCTGACCGAGCTGGAGCTGGAAGGCCGGATC GTGGCGCAGCAGGGCAGCTGGAGTCGCCTCGGCTAGCGGGGGATGACTGGCATCGGCGGCGCGCTCGGGTAGACTTCAGGGATTTGGCGGAGGCAAGGCG
DNA Sequence for Gene
>UM91_RS04975
ATGCACAACAGCTGGCGAGTGCGGCAGGCGGCGCGAATCGTGCGCGAGGGGGGCGTCCTGGCCTACCCCACCGAGGCCGTCTGGGGCCTGGGCTGCGATC CCTGGGATCAGGCCGCGGTCTATCGCCTGCTGATGCTCAAGCATCGGCCCATGGAAAAGGGTCTGATCCTGGTGGCCGACAACATCCGCCAGTTCGACTT CCTGCTGCACGATCTGCCGGAAGAGTCCCTGGCCAAGCTGGCCAGCACCTGGCCGGGGCCCAACACCTGGCTGGTGCCGCACCACAATCGCCTGCCCGGC TGGGTGACCGGCGCCCACGCCACCGTGGCATTGCGAGTCTCCGAGCATCCCCTGGTGGGCGAACTCTGCGCCCTGACCGGGCCGCTGATCTCCACCTCGG CCAATCCCGCCGGTCGCCCGGCCGCCCGCACGCGGTTGCGGGTTCAGCAATACTTTCCCAAGGGCCTCGACGGCATCCTCACGGGTGAACTGGGCGGGCG CAAGAATCCCAGCGTGATTCGCGACCTGGTGACCGGCAAGGTCTTCCGACCCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCAGTCCAGCAGCTGGCGCAGCAACCGCGCCAGGGCATCGATCTGGAACGGCTTGGCCAGCGAGGGCTCGCCGTTCGGCGTCGGGCGCTCGGCGTGACC GCTGACGAACAGCACCGGCAGCTCCGGCCAGCGCTCGCGCAGGCGTCCTGCCAGCTCGGCGCCATCGAGATCCGGCAGGCCGAGATCGGTGATCAGCAGG TCACAGGGCAGGTCGCCGTCGACCAGGGTGAGCGCCGCTGAGGCACTGGCCGCGGTGCGCACGCGATAGCCCAGCTCGGTGAGCATCTCGCGCAGCAGCA GCCGCACCGAGACATCGTCTTCCACCAGCAGCAGGCGTTCGCCCCGACTCTGGGCGATGGCCGCCTGGGGCGTCGCGCTCGCCGCCGGCCGCTCGGGCTG GGCACAGGGCAGCCAGAGACTGACCCGGGTGCCACTGCCCAATTCGCTCTCCAGGGTCACGTGGCCACCGGACTGCTTGATGAAGCCATAGAGCATCGAC
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MHNSWRVRQAARIVREGGVLAYPTEAVWGLGCDPWDQAAVYRLLMLKHRPMEKGLILVADNIRQFDFLLHDLPEESLAKLASTWPGPNTWLVPHHNRLPG WVTGAHATVALRVSEHPLVGELCALTGPLISTSANPAGRPAARTRLRVQQYFPKGLDGILTGELGGRKNPSVIRDLVTGKVFRP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site