Pseudomonas oryzihabitans RIT370, UM91_RS19300
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas oryzihabitans strain RIT370 contig23, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GATGGTGCGTGACGCCGAGGCCAATGCCGACGAGGATCGCAAGTTCGAAGAGCTGGCCGCGGCCCGCAACCAGGGCGATGCCCTGGTGCACGGCACCCGC AAGATGCTGACCGAGGCGGGCGACAAGGCCACCGCGGAAGAGAAGAGCACCATCGAGAAGGCCATTGGCGAACTGGAAACCGCCGTACGCGGTGACGACA AGGACGCCATCGAAGCCAAGATGAATGCCCTGTCCCAGGCCTCCGCGCCGCTGGCCCAGAAGCTCTATTCCGAGCAGGGCGCTGGCGCCGGTGCCGAAGG CGCCTCGGCCAAGGCGGACGGTGATGCCAAGAAGCCCGGCGACGACGTGGTCGATGCCGAGTTCGAGGAAGTGAAGGACAACAAGTAAGCCCCGTGCTTA CCGCACCTGGCGGGCTTCGGCCCGTCGGATCCGCCACGCGGGAGCCTGCTCCCGCGTTGGCGTGTCTGGAGGGTGAGAAAATTTAAGGTGCAGAAAGTCT
|
|
| DNA Sequence for Gene |
>UM91_RS19300
ATGGCCAAACGTGATTACTATGAGGTGCTCGGGGTCGAGCGCGGCGCCAGCGAAGCCGAGCTCAAGAAGGCCTACCGACGCCTGGCGATGAAATACCACC CGGATCGCAATCCGGGGGACGCGGCTGCCGAAGAGCAGTTCAAGGAGGCCGCCGAGGCCTACGAAGTGCTGTCCGATGCGGGCAAGCGCTCGGCCTACGA CCAGTACGGCCATGCTGGCGTCGATCCGAGCATGGGCGGCGGCGGTTTCGGTGGCGCGGCGGGAGGCGCGAGCTTCTCCGACATCTTCGGCGATGTCTTC AGCGACTTCTTTGGCGGACGCGGTGGCGCCGGTGGACGCGGCGGCCCGCAGCGCGGTGCCGACCTGCGCTACACCCTGGACCTGGATCTGGAAGAGGCGG TGCGTGGGACCACGGTCACCATTCGCGTGCCCACCCTGGTCGAGTGCAAGGTCTGCGATGGCAATGGCGCCAAGCCGGGTACCTCGGCGTCCACCTGCCC CACCTGCGGTGGCATCGGCCAGGTGCGCATGCAGCAGGGCTTCTTCTCGGTCCAGCAGACCTGCCCGCGCTGCCACGGCAGCGGCAAGATCATTCCCGAG CCCTGCAACGCCTGTCATGGTCAGGGGCGCGTGGAAGAGCAGAAGACCCTGTCGGTCAAGGTGCCCGCAGGCGTCGACACCGGCGACCGCATCCGCCTGA CCGGCGAAGGCGAGGCGGGGACCCTAGGTGGCCCCAGTGGCGACCTCTATGTCGTGGTCAATGTGCGCGAGCACTCGATCTTCCAGCGCGACGGCAAGCA CCTCTATTGCGAGGTGCCGATCAACTTCACCGACGCCGCCCTGGGTGGCGAGCTGGAAGTGCCGACCCTGGATGGCCGCGTCAAGCTGAAGATTCCCGAG GGCACCCAGACCGGCAAGATGTTCCGCCTGCGCGGCAAGGGCGTGACGCCCGTGCGTGGCGGTGGCGCCGGCGATCTGATGTGCAAGGTGGTGGTGGAGA CTCCGGTCAACCTGAGTCGGCGCCAGCGCGAGCTGCTCGAGGAATTCCGCAACACCCTGCAGAGCGACAGCTCCCATTCGCCCCGGGCCAGTGGCTGGTT CGACGGCATGAAGCGCTTCTTCGACGACCTCTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACCGGCAGGGGCGCCGTCGCGAGGCGGCGCCCGGCCAGCAGCCTGGAGCTGATGATGCGACGTATAGCTGTAATGGGCGCCGCGGGGCGCATGGGCAAGA CCCTGATCGAAGCGGTCCAGCAGACCCAGGGCGCTGCCGGTCTCACCGCCGCGGTGGATCGCCCGGAAAGCAGTCTGGTAGGTGCCGACGCCGGCGAACT CGCCGGTATCGGCCGCAACGGAGTGATGCTGTCGGGCGATCTGGCGCGGGTGCTGGATGATTTCGATGTGCTCATCGACTTCACCCATCCCAACGTGACC CTGCAGAATCTGGCGCTCTGCCGCAAGGCCAGGAAGGCCATGGTGATCGGCACCACCGGCTTCACCGCCGAGCAGAAGCTGACCCTGCTGGAAGCGAGCA AGGAAATTCCCATCGTCTTCGCCGCCAACTTCAGCGTCGGCGTCAATCTCTGCCTCAAGCTGCTCGACACCGCCGCCCGCGTGCTGGGTGACGAGGTCGA
|
|
| Amino Acid Sequence |
>molecular chaperone DnaJ
MAKRDYYEVLGVERGASEAELKKAYRRLAMKYHPDRNPGDAAAEEQFKEAAEAYEVLSDAGKRSAYDQYGHAGVDPSMGGGGFGGAAGGASFSDIFGDVF SDFFGGRGGAGGRGGPQRGADLRYTLDLDLEEAVRGTTVTIRVPTLVECKVCDGNGAKPGTSASTCPTCGGIGQVRMQQGFFSVQQTCPRCHGSGKIIPE PCNACHGQGRVEEQKTLSVKVPAGVDTGDRIRLTGEGEAGTLGGPSGDLYVVVNVREHSIFQRDGKHLYCEVPINFTDAALGGELEVPTLDGRVKLKIPE GTQTGKMFRLRGKGVTPVRGGGAGDLMCKVVVETPVNLSRRQRELLEEFRNTLQSDSSHSPRASGWFDGMKRFFDDL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|