Strain | Pseudomonas oryzihabitans strain RIT370 contig22, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCTATGCGCCCTGCAACACCATGGAGACGCTGCTGGTCCATGCGGCCATCGCGGAGCGGGTGTTGCCGCCCCTGGCCGCCATCTATCGCGACAAGCAGG TGGAGCTGCGCGGCTGCGAGCGGACCCGAGCGCTGCTCGGCACCGACGTCCTGCTGGCCAGCGAAGAAGACTGGCGCACCGAATACAACGCGCCGATCCT GTCCATTCGGGTGGTGGATGGCCTCGATGCGGCCATCGAGCACATCAATGCCTATGGCTCGCAGCATACCGATGCCATCGTCACCGAGAATTTCAGCGAC GCCCGGCGTTTCCTGACCGAGGTCGATTCGGCGTCGGTGATGGTCAATGCCTCCACGCGCTTCGCCGACGGCTTCGAATACGGCCTGGGCGCCGAGATCG GCATCTCCACCGACAAGCTGCACGCCCGCGGGCCGGTGGGCCTGGAAGGACTGACCAGCGAGAAATACGTGGTCTTCGGCGACGGTCACGTCCGCAGCTG
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DNA Sequence for Gene |
>UM91_RS19190
ATGAGCAGCCTGCCCGCCCGCATCGGCTTGTTCGGCGGTACCTTCGATCCCGTGCACATCGGTCACCTGCGCGCGGCGCTCGAGGTGGCCGAGGCCCTGG CGCTGGACGAACTGCGGCTGATCCCCAGTGCCCGGCCGCCCCATCGCGAGGCGCCCAGCGTCTCCGCCGAGGATCGCCTGGCGATGGTGCGCCTGGCGGT GGCCGACGTCGCGACCCTGGTGGTCGATGACCGGGAACTGCGCCGGACGCGCCACTCCTATACCATAGAGACCCTGGAAAGCCTGCGCGCCGAACTCGGC GATGAGGTGCAGCTGTTGCTCATGCTGGGCTGGGACGCCTTCTGCGGCCTGCCGAGTTGGCACCGCTGGCGCGAGTTGCTGGAGCTGTGCCACATCCTGG TCCTGCAACGACCCGACGCCGACAGCGAGCCCTGCCAGGAATTGCGCGATTTCCTGGCGGCGCGCAGTCAGCCCGATCCCCAGGCCCTCAAGGGGCCGGG CGGGCAGATCACCTTTATCTGGCAGAACCCGCTCGCGGTGTCCGCCACCCAGATCCGCGGCCTCTTGGCCACCGGGAAGTCCATCCGCTTCCTGGTGCCC GATGCCGTGCTTGACTACATCCGGACGCACGGCCTCTATCCGGCGTCCTCCGAACCGAGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GAGCTACACCATGCAAAGCGAACAACTCGTCCAGGTGGCCATCGCCGCCCTGGAAGACATGAAGGCCCAGGACATCATCTCCCTGGACGTGCGGGAAAAG ACCAGCGTGACCGACATCATGGTCATCGCCAGCGGCACCTCCAGCCGCCACGTCAAGTCGCTGGCCGACAACGTGCTGGAAAAGGTCAAGCAGCAGGGCG TGCGCCCGCTGGGCAGCGAAGGCCTGGAAGGCGGCGAATGGGCGCTGCTGGACCTGGGCGACGTGGTCGTCCACGTGATGCTGCCGACCACCCGCGAGTT CTATGACCTCGAGCGCCTCTGGCGCGGTGCCGAGCAGAGCCGCGCCGCCCACGGCGAATAAGCCCGGTGCGCCTGCGTCTCATCGCCGTCGGCTCGCGCA TGCCGCGCTGGGTCGAAGAGGGCTGGCACGAGTACGTCAAGCGTCTGCCGCCGGAACTGCCGCTGGAACTCGTCGAGATCCCGCTGCAGACCCGGGGCAA
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Amino Acid Sequence |
>nicotinate-nucleotide adenylyltransferase
MSSLPARIGLFGGTFDPVHIGHLRAALEVAEALALDELRLIPSARPPHREAPSVSAEDRLAMVRLAVADVATLVVDDRELRRTRHSYTIETLESLRAELG DEVQLLLMLGWDAFCGLPSWHRWRELLELCHILVLQRPDADSEPCQELRDFLAARSQPDPQALKGPGGQITFIWQNPLAVSATQIRGLLATGKSIRFLVP DAVLDYIRTHGLYPASSEPR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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