Pseudomonas oryzihabitans RIT370, UM91_RS18605

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas oryzihabitans strain RIT370 contig21, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCAGCGAGACGGAACAATCCACAGCTTCTGTTGATAACTTTGTTGAAAACATGGTGGAAAAGAACCCGGAGCCTTGCTCTGCGGGCCCCTCAAACAAGT TGATCATTTTTTAATCACTTTAATAAGTTCAACATAATCAACAACTTAATTTAAAAGCAGGATTTCCGGCAGGCAAAACTCCGGGCGAAAGAGGGCTTGA CAAGCGCTAGCACAACTTGTGCACAACTCCGGATGAAAATGACCAACGGAGACCTGTCAGCCGTCGCACAATTGTCAAGTATTCGTGAAACAAATTTTTG CGCCATCTTGCCGAGGGCGGTAGCCGGAGGCAGCCCGCAGGCTAGAGCCGACAGCCAGGACAGAGGGCAGGCCAAAGGCTAGCCTTGTCCTCTGCCGGTC ATCGGGTAGACTGCCTGCTTTTGCTCAGGGCTGTCGTGGCGACGCCCACCCTGTCAATCAGGCATGGACGCGCCAGCCCTTCTGGAATCAGCTCAGTCAC
DNA Sequence for Gene
>UM91_RS18605
ATGAACGTCTTCATCGCCGGTCAACACGGCCAACTCTCTCAGGCGCTGCAAAAACTGCTGGCCACCAAGGCCCAGGTAACCGTCATCGGCCGGGCCCAGG TGGATTTCACCCAGCTGGACGCGCTCCATGACCGCGTCCTGGCCGCAAAACCCGATGTCATCATCAATGCCGCCGCCTATACCGCCGTGGACGCCGCCGA GAGCGACGCCGAGACCGCGACCCTGATCAACGAGCGGGTGCCCCAGGTCTTCGCCCGGGCGGCGCAGCAGCTGGGCATCCCCATGGTCCACTACTCCACC GACTACGTCTTCGATGGCACCAGGGAAGGCCGTTACCGGGAAGAGGATCCGACCTGTCCGCTCAATGTCTATGGCCGGACCAAACTGGCTGGCGAGAACG CCGTGCGCGAACACGCCGAACGCCACCTCATCCTGCGCACCAGCTGGGTCTATTCTTGGCAGGGCAACAACTTCCTGCGCACCATGGTGCGGCTGCTCAG CGAGCGCGACGAACTGAACATCGTCGACGACCAGATCGGCGCACCCACCTGGACCCGGACCATCGCCGACGCCACCGAGCGCCTGCTGGCCCACAGCAAC CAGGACGATGGCCTCTGGGGCACCTATCACCTGACGGCCAACGGCACCACCTCCTGGTACGGCTTCGCCGAGCAGATCGCCCAGCGCCTGCGCGAGACCG GTCAGCTGAAGGCTCGTCTCAATCCGATCCCCAGCAGTTCCTACCCCACCCCGGCGCATCGCCCCATCAATTCGCGGCTGTCCACCGAAAAGCTGGCAGC GGTGCTGGGGCAGCCGCTACCCGACTGGCAAGCGGCTTTCGCCCAGTGCTGGAGCGAGCGCGAACTTCAGGTGAGCGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACGGGCCGTCGGTCATACTTCTGGGATCTCCTCCAGAACTACCCCAGCCCCTGGAAGTCAATGGCACTGACCCCGCTCACGCCAGTCAGGTACGTCATG GACAACCCTTTCCAACTCATCGCCGCGGCTTTCGAGCAAGACTTTCGGGTCAATTTCCGCATCGAACGTCTCGACGGCAGCGTCAGCCTGACGCTGTCCG ACGATAGCGGCGTCAAGGTCAAGCGGTTGATCAGCAAGCAGCAATTGCATGACCACACCCGCCTCGCGCGCCTGATCGACAGCATCCGGCTGGGTATCGC CATCGACGAGGGCCATGGCGTCACGGCCCTGCTGGCCGGTGGCACTGGCGGTGCGCCCCGTCTGACCGTCGCGAACTGAGCAGGGATCCGCGCTATGCAT ACCATGGAAGGCTCCACCCCTCGTCTCATGCAGGCGGCGAACGCCGCGCCGTTGCTCGACAGTCTGGAAACGGCGGCGCCCGAGCGGCAGCCGGCGCCCA
Amino Acid Sequence
>dTDP-4-dehydrorhamnose reductase
MNVFIAGQHGQLSQALQKLLATKAQVTVIGRAQVDFTQLDALHDRVLAAKPDVIINAAAYTAVDAAESDAETATLINERVPQVFARAAQQLGIPMVHYST DYVFDGTREGRYREEDPTCPLNVYGRTKLAGENAVREHAERHLILRTSWVYSWQGNNFLRTMVRLLSERDELNIVDDQIGAPTWTRTIADATERLLAHSN QDDGLWGTYHLTANGTTSWYGFAEQIAQRLRETGQLKARLNPIPSSSYPTPAHRPINSRLSTEKLAAVLGQPLPDWQAAFAQCWSERELQVSG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site