Strain | Pseudomonas oryzihabitans strain RIT370 contig20, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AATACCTGCCGCATATCGAAACCTTCCTGGCCACCGGCGACGGTGACTTCGACGGCCCGATCTGGGCCAAGGCCACCAGTGAAATCAAGTTCGTCGACGG CCGCGCGAGCTTCACGATGGTTCATGAATTCATGAGCCGCGACGGCAGCCGCATCTCGACGGTCGACACCGCCACAGGCATCCAGGTGCCGGGCATCGAC GAGGTCTCGCTCACCGTCATGCACAAGGTGGTCGATTCCACCGGCAAGTTCGAAGGCCTGCGCGGCACCTTCCCGAGCTTCGGACTGCACAACTTTGCCA CCGGCAAGGGCGTGCAGCGCTTCGGCGGCGAACTGAGCTGAAGTCAGCGCTAAGCAGCAGGTGCACCCGCTGATCGTGGGTGCGCCGGACGACCTCTCAA GGCGGCGCCGCCGGCACAGACCGACGGCGCCGCTTCTTCAAGGAGCACAGACGTGACACCCGAAGTTGAGGCAGCACTGCCGCGCCGCCTTCTGCACACC
|
|
DNA Sequence for Gene |
>UM91_RS18310
ATGCTGCGCGTGGGCGACCTGGATCGCTCCCTGCGCTTCTACACCGAGGTTTTCGGTATGGACGTGTTGCGCCGCGAGGACTACCCGGACGGCCAGTTCA CGCTCGCCTTTCTGGGCTACGGCAGTGAGGCCGATCACAGCGTGATCGAGCTCACCCACAACTGGGGTCGCAGCGAATACGAGCGTGGAAACGCCTACGG TCATATCGCCTTGGCCGTGGATGACGTGTATGCCGCCGTAGAGCGCTTGAAGCAGCTCGGCGCGAGCGTCAGCCGGCCCGCCGGTCCACTGAGCAGCCGC CCAGCGGATGGCAGCGAGCCCGACGTGATTGCTTTCGTCGACGACCCCGACGGCTACCGAATCGAGTTGATCCAACGCCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ATCCAACGCGGCACCCACACTTTTTTTTTGGGACCAGCATGAATTCATTCGACACGTTCAACTGGCTTCGCTCTGCGCGTCGCCTTCTTAGCGCCGGACT GGTCGCAACGACCATCGGTCTTGGCCTGGGCGCATCGCTCGCCTCGCACGCTGCACCCACAGCGGCTCCAGCAGCCGCTGCAGCAAGCACGCCGGTCGCA TACCGTTATGCTGTCGTCGACGGCGTGCGCGTCTTCTACCGCGAGGCCGGACCCGCCGAAGGCCCGCAGGTGCTGCTGCTCATGGGCTTCGGTGGCTCGT CATACATGTTCCGCGATCTCATCCCGAAGCTTGCGGCCGCCAACTATCACGTCATCGCGCCCGACCTTCCGGGGTTCGGCCTCACCGAAGTGCCGCCGGC GCGCAACTACCGCTATCGCTTCGAGAACATCGCCAACACGATGGAAGCCTTTACCGAAGCGGTGAAGTTCAACCGCTACGCGGTCTACGTGTTCGACTAC
|
|
Amino Acid Sequence |
>glyoxalase I
MLRVGDLDRSLRFYTEVFGMDVLRREDYPDGQFTLAFLGYGSEADHSVIELTHNWGRSEYERGNAYGHIALAVDDVYAAVERLKQLGASVSRPAGPLSSR PADGSEPDVIAFVDDPDGYRIELIQRR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|