Pseudomonas oryzihabitans RIT370, UM91_RS04355

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas oryzihabitans strain RIT370 contig2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGATCGCCTGGACTCGGCGCGCATCGGCAGCTCCCGCGCCATCACCCAGCTGATCCTCAACCTGGTGGAAGGCACCCCGATCAAGCTGGTCGACGGGG GCGCCCAGAAGCGCTGCTTCACCGACGTCGACGACGGCATCGAGGCGCTGTTCCGCATCATCGAGAACAGGGGCGGTCGCTGCGACGGCCAGATCGTCAA CATCGGCAACCCGGACAACGAAGCGAGCATCCGCGAACTGGCCGAAGAGCTGCTGGCGCAGTTCGAGGCCCATCCGCTGCGCCACGAATTCCCGCCCTTC GCCGGCTTCCGCGAGGTGGAGAGCAAGAGCTTCTATGGCGACGGCTACCAGGACGTGGCCCACCGCAAGCCCAGCGTGGAAAACGCCCGTCGCCTGATCG ACTGGCAGCCGACCACCGCCATGGCCGCCACCGTCGGCAAGACGCTGGACTTCTTCCTGCGCGAAGCCCTGGCGCAGCGGGAGGCCTGATGAACACCCTG
DNA Sequence for Gene
>UM91_RS04355
ATCCCGGCCAGCCTGCGCATCGACGTGGACACCTATCGCGGCACCCGCGAAGGGGTACCGCGGCTGCTCGACCTGCTGGACGAGGCCGGGGTCAAGGCCA CCTTCTTCTTCAGCGTCGGGCCGGACAACATGGGGCGCCACCTCTGGCGCCTGGTGAAGCCCACCTTCCTGTGGAAGATGCTGAGGTCCAAGGCCGCCAG CCTCTATGGCTGGGACATCCTGCTGGCCGGCACCGCCTGGCCGGGTCGGCCCATCGGTCGCGACCTCGGTCACCTGATGCGCGAGACCCGCGCCCGCGGC CACGAGGTCGGCTTGCACGCCTGGGATCACCACGCCTGGCAGGCCCATACCGGCAGCTGGAGCATGGAGCGTCTAGGTCAGGAATTCGGCCGTGGCCTGC AGGCCCTGGAAGACATCCTCGGCGCCAGGGTCGACTGCTCCGCCGCCGCCGGCTGGCGCGCCGATCCGCGCGTGGTGCTGGCCAAGGAGGCCTTCGGCCT CCGCTACAACAGCGATTGCCGCGGCAGTGCGCTGTTTCGTCCGCGGCTGGGCAATGGCAGCCACGGCACCCCCCAGGTGCCGGTGGACATGCCGACCTTC GACGAGGTGGTCGGCCCGGAGCTGGCCGCCGGTGACTGGAACAGCTATCTGCTCAAGCGCTTCCGTCCGGGGGCGCTCAACGTCTACACCCTGCACGCCG AGGTGGAAGGCATCGCCTTCGCCAATGACTTCCGCGCCCTGCTCAAGGCCGCGCGGGAGCAGGGCATCCTGTTCCTGACCCTGGGCGATCGCCTGCCGGC CGATCCGCGCCAGTTGCCCGCGGGCAATCTGGTGCGTGGCAGCCTGGCCGGCCGCCAGGGCTGGCTGGGCGTGCAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCGGCGTCGCCTGTGGATGCTGCTGCCGCTGGCGCTGCTGGCCTATGCCCTGCCGCTGGCCTGGCGCGGCCTGTGGATTCCGGACGAGTCGCGCTATGC GCAGATCGCCCAGGAACTCTGGCGGCGTGGCGACTGGGTGGTGCCGCACTTCCTCGGCCTGCCCTATTTCGAGAAACCCATCGGCGGCTACTGGACCCAG GCCATCGCCCAGGCCTGGCTCGGTGACTCGCTGTTCAGCGTGCGCCTGGTGCCACTGCTGGCCAGTCTCGCCACCACCGCCCTGGTGGTGCGCCTGACCC GGCTGATCTGGCAGGACCGCCCGCTGGCGCTGCTCGCCGGGGTGGTCTATCTCTCCTGCGTGGCCGTGGCGGGGCTGGCCACCTACGTGACCCTCGACGC CCAGTTCGCCTTCTGGATGGCCCTGGCGCTGCTCGCCCTCTGGCAGGTCCAGGCCGCCGAGACCCGCGGCGCGGCCCTGGTGCAATGGGCGCTGCTGGGG
Amino Acid Sequence
>4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase
MPASLRIDVDTYRGTREGVPRLLDLLDEAGVKATFFFSVGPDNMGRHLWRLVKPTFLWKMLRSKAASLYGWDILLAGTAWPGRPIGRDLGHLMRETRARG HEVGLHAWDHHAWQAHTGSWSMERLGQEFGRGLQALEDILGARVDCSAAAGWRADPRVVLAKEAFGLRYNSDCRGSALFRPRLGNGSHGTPQVPVDMPTF DEVVGPELAAGDWNSYLLKRFRPGALNVYTLHAEVEGIAFANDFRALLKAAREQGILFLTLGDRLPADPRQLPAGNLVRGSLAGRQGWLGVQA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site