Pseudomonas oryzihabitans RIT370, UM91_RS03745
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas oryzihabitans strain RIT370 contig2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAGGCGGATGTCGGTGGCCACTTGGTCATTGCGGCTGCGACCGGTGTGCAGCTTCTTGCCGACCACGCCCAGGCGCTCGGTCAGGCGCGCCTCGATGTTC ATGTGCACGTCTTCCAGGTCGACGCGCCACTCGAAGGTGCCGGCCTCGATCTCGCCACGGATCTCGTCCAGTCCGGCGACGATGGCATCGCGCTCGGCTT CGCTGAGCACTCCGGCCTGGGTCAGCATGCGGGCATGGGCCTGGCTGCCGAGGATGTCGTGGCGGTAGAGACGCTTGTCGAAGTCCACCGAGGCGGGGAA GCGGGCGACGAAGGCGTCGACGGGTTCGCTGAAGCGTCCGCCCCAGGACTGGTTGGTTTTTTCGCTGCTCATGGATCGGCCTGCTGCTGGGCTTGTCGGT AAGGAAAGGAGGGGGCCGATGATAGCAGTCCTGAGCGGGTGCCGGCCCGATTCAACGGAGCCGACTTGCCGACGAGTGGTATCTGACCCACACTGCCTCC
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| DNA Sequence for Gene |
>UM91_RS03745
ATGATACTCGAACGCCGCAAAACCCCCCGACCGGTCAAGGTCGACGACTTCTTCGTCCCGGCGCTCTGCGAACCGGAGGCCCTGCTCGTGCTGGTGGTGC TGGCCGAGCTGCTGGTGCTGGTCCTGGTGCTGGCAGAACCCTTCACCCTGCAGTTCAACTGGATCCGCCTGGCGCTGGTGTCGCTGTTCGTGCAGTGGAT CGTGCTGCTGTCGGCGGCGCTGCTCTGTCGCCTGCGGCCCTGGCTGGCACGCCATAGACCGGTGGTGGCGGGTGGCTTCTGCTGCGCCATCGTGGTGGCC CTGACCCTGCTCTGCACCCTGGTGGCCGACTGGCTGCAGCTGGCCGGACCCCTGCAGCGGGTCGGCGAGGTGCGGCTGTACATGAGGCACGCGCTGATCG CCCTGATCATGTCCATGCTGCTGCTGCGCTACTTCTGGCTGCAGAGCCAGTGGCGCCGCCAGCAGCAGGCCGAATTGCAGGCGCGCATCGAGTCGCTGCA GGCGCGCATCCGCCCGCATTTCCTGTTCAACAGCCTGAACAGCATCGCCAGCCTGGTCGCCCTGGACGCCGACAAGGCCGAGCGCGCGGTGCTGGACCTG TCGGCGCTGTTTCGCGCCAGCCTGGCCCAGCCCGGCACCAAGGTGCGCTGGGTCGAGGAGCTGGAGCTCTCGCGGCGCTATCTGGAGATCGAACGCCTGC GCCTGGGCGATCGCCTGCAGTTGCAGTGGGACGTGGACGGGGTGCCGGCGGATCTGCCGATTCCCCAGCTGACGCTGCAGCCGCTGCTGGAAAACGCCCT GATCTATGGTGTGGCGCCGCGCATCGAAGGGGGCCTGGTCACCATCTTCGCCACCTACCGGGAGGGGGTGTTCGAGCTGGTCATCAGCAACCCCTATGAC CCCGAGGTGGAGCAGCAGCCACGCCCACCCAAGGGCACCCGTCAAGCTTTAAGCAATATCGAGGCGCGATTGACGGCACTTGTCGGACCAGCTGCGAGTC TCAAAATCGAACGCCGCGACCAGCGGCATACAACGTCTCTTCGCTATCCATGCGAGCGACTCATGCGGGAAGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTTATGAATGTCCTGATCGTCGATGACGAACCCTTGGCGCGCGAGCGTCTGGCCCGTCTGGTGGGGCAACTGGACGGTTACACCGCCCTGGAGCCAACA GCCACCAACGGTGAGGAAGCCCTCGCTTTGGTTGAAAACCTCAAGCCCGATATCGTCCTGCTCGACATCCGCATGCCGGGTCTGGACGGTCTGCAGGTGG CCGCGCGTCTCTGCGAGCGCGAATCGCCGCCCGCGGTGATCTTCGTGACCGCCCACGACGAATACGCGCTCGACGCCTTCCAGGTCAGCGCCGTGGGCTA TCTGGTCAAGCCGGTGCGGCAGGAGGACCTGGCCGCTGCCCTGAGCAAGGCCCAGCGACCCAACCGGATGCAGCTGGCCGCCCTGACCAAACCGCCGGCC AGTGGTGGCCCGGGTCCGCGCAGCCATATCAGCGCCCGGACCCGCAAGGGCATCGAGCTGATCCCCCTGGACGACGTGGTCTATTTCATCGCCGACCACA
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| Amino Acid Sequence |
>alginate O-acetyltransferase
MILERRKTPRPVKVDDFFVPALCEPEALLVLVVLAELLVLVLVLAEPFTLQFNWIRLALVSLFVQWIVLLSAALLCRLRPWLARHRPVVAGGFCCAIVVA LTLLCTLVADWLQLAGPLQRVGEVRLYMRHALIALIMSMLLLRYFWLQSQWRRQQQAELQARIESLQARIRPHFLFNSLNSIASLVALDADKAERAVLDL SALFRASLAQPGTKVRWVEELELSRRYLEIERLRLGDRLQLQWDVDGVPADLPIPQLTLQPLLENALIYGVAPRIEGGLVTIFATYREGVFELVISNPYD PEVEQQPRPPKGTRQALSNIEARLTALVGPAASLKIERRDQRHTTSLRYPCERLMREA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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