Pseudomonas oryzihabitans RIT370, UM91_RS18015

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0015628	protein secretion by the type II secretion system	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00813	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0015627	type II protein secretion system complex	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00813	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
NCBIfam	TIGR02532	JCVI: prepilin-type N-terminal cleavage/methylation domain	IPR012902	Prokaryotic N-terminal methylation site	10	33	6.9E-7
PANTHER	PTHR30093	GENERAL SECRETION PATHWAY PROTEIN G	-	-	8	74	9.7E-10
PRINTS	PR00813	Bacterial general secretion pathway protein G signature	IPR000983	Bacterial general secretion pathway protein G-type pilin	12	37	1.8E-20
Gene3D	G3DSA:3.30.700.10	Glycoprotein, Type 4 Pilin	-	-	26	144	4.9E-39
Pfam	PF07963	Prokaryotic N-terminal methylation motif	IPR012902	Prokaryotic N-terminal methylation site	9	32	3.3E-9
Coils	Coil	Coil	-	-	45	65	-
Pfam	PF08334	Type II secretion system (T2SS), protein G	IPR013545	Type II secretion system protein GspG, C-terminal	35	144	2.4E-43
SUPERFAMILY	SSF54523	Pili subunits	IPR045584	Pilin-like	39	144	8.89E-39
NCBIfam	TIGR01710	JCVI: type II secretion system major pseudopilin GspG	IPR010054	Type II secretion system protein GspG	12	144	1.4E-61
PRINTS	PR00813	Bacterial general secretion pathway protein G signature	IPR000983	Bacterial general secretion pathway protein G-type pilin	48	66	1.8E-20

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.