Pseudomonas oryzihabitans RIT370, UM91_RS14420

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas oryzihabitans strain RIT370 contig12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCAGCAGCCTGTCTCTACTGGAGAAGCACAAGGCCAAGACCCTGATCGTGGTGGACAGCGCCGGCCAGCAGGCCGGCGCCGTGTGCGGCGATCTGCAGA AGGCCGGCTTCACCGCCGCTCGGCTGAACGGCGGCATCGCCACCTGGCGTGCAGAGAATCTGCCCCTGGTGAAGTGAACCCCTAGCGTGGCCGCCTCATC GGCCACTGGAGACCGCGCATGTCTGACGTCGTCATCTATACCAGTGCCTGGTGTCCCTATTGCCATCGTGCCAAGCACCTGCTCGATCGCAAGAACGTGG CCTACCGGGAAGTCTCCGTCGACGGCCAGCCGGCGCTGCGCAGCGAGATGGCCCGCAAGGCCGGTCGCACCAGCGTGCCGCAGATCTGGGTCGGCAGCAC CCACGTCGGCGGTTGCGACGATCTCTATGCCCTAGACCGAAGCGGACGTCTCGATCCGCTGCTGTCCGCCTGACCAACACTCATCACTCAAGGCCCTACC
DNA Sequence for Gene
>UM91_RS14420
ATGACCGACCAAGCCAATGGCGCCCAGGAAGACGGCGCTCAGTTCTCCCTGCAACGCATCTACATCCGCGACCTGTCCTTCGAAGCGCCCAAGAGCCCCG AGATCTTCCGTCAGGACTGGCAGCCCAACGTCAACCTGGACCTGGCCACCCGCCAGAAGACCCTGGGCGACGACTTCCACGAAGTGGTGCTGACCCTGAC CGTGACCGTCAAGAACAACGAAGAGACCGCCTTCATCGCCGAAGTGCAGCAGGGTGGCATCTTCCTGATCAAGGGCCTGGACGCCGCCTCCATGGCCCAT GCCCTGGGCGCCTTCTGCCCCAACATCCTGTTCCCCTACGCCCGTGAAGCGCTGGACAACATGGTGGTGCGTGGCTCCTTCCCCGCGCTGATGCTGCAGC CGGTGAACTTCGACGCCCTCTACGCCCAGGAACTGGCGCGCATGCAGACCGCCGGCGAAGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGGCGCCGCAGCGGTGACGAACGCCCCTTGCGAGGGGCGTTCTGCTATCCGGCCTTCAGCTTGCGACTGGCGCGCCAGAGATCGAAGCTGAACACGGCA AGGCCCGTCCAGATGCAGATGAAGGCGAACAGCCGCTCGCGGGGGAAGGGTTCGTCGTAGAGCCAGACCGCCTGGATCAGCACCAGGGTCGGCGCCAGGT ACTGCAGGAAGCCCAGGGTCGAATAGGGCAGCTTGCGCGCCGCGGCGTTGAAGCACAGCAACGGGATCAGGGTGACCGGCCCGGCCAGCACGATCAGCAG GCCCAGCGAGGATTGCCAGGTCTCCGCCTGCAGACTCACCCCCGGGTTCAGCAGCGGCAGCGCGACCAGGGCGATCGGCACCAGCATCCAGCTCTCCACC ACCATGCCCGGCAGCGCGGCTACCGGCGTCTGCCGCCGCACCAGGCCATAGAAGGCGAAAGTCAGCGCCAGCGCCAGGGAGACCCAGGGCAACTGCCCCA
Amino Acid Sequence
>preprotein translocase subunit SecB
MTDQANGAQEDGAQFSLQRIYIRDLSFEAPKSPEIFRQDWQPNVNLDLATRQKTLGDDFHEVVLTLTVTVKNNEETAFIAEVQQGGIFLIKGLDAASMAH ALGAFCPNILFPYAREALDNMVVRGSFPALMLQPVNFDALYAQELARMQTAGEA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site