Pseudomonas oryzihabitans RIT370, UM91_RS13955

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30456
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0033856 pyridoxine 5'-phosphate synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30456
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0008615 pyridoxine biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30456
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30456 PYRIDOXINE 5'-PHOSPHATE SYNTHASE IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ 7 240 8.9E-103
Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ 9 239 1.0E-100
NCBIfam TIGR00559 JCVI: pyridoxine 5'-phosphate synthase IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ 9 240 2.8E-94
CDD cd00003 PNPsynthase IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ 8 239 0.0
Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ 1 244 118.311531
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 1 244 2.3E-113
FunFam G3DSA:3.20.20.70:FF:000042 Pyridoxine 5'-phosphate synthase - - 4 243 3.4E-120
SUPERFAMILY SSF63892 Pyridoxine 5'-phosphate synthase IPR036130 Pyridoxine 5'-phosphate synthase 7 240 5.49E-96

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.