Pseudomonas oryzihabitans RIT370, UM91_RS13580

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas oryzihabitans strain RIT370 contig11, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCACACCCCGCCGCCCTGGCTGGATACCCTCGCCGAGCTGGGTTTCCCGGTGCGCTGGACCGACGACATCGACGCCCGCCTGTGGCGCAAGCTGGCGATC AACTGCGCCATCAATCCGCTGACCGTGCTCTATCGCTGCCCCAATGGCGAACTGCGCCAGCATCTGCCCGAGGTCACGGCGCTCTGCGACGAACTGGCGG CGCTGCTGGAAGCCATGGGCCTCGCCCCGGCGGCCCAGGGGCTGCAGCAGGAGGTCGAGGCGGTGATCGCCGCCACCGCCCACAACAGATCCTCCATGCT GCAGGACGTGGAGCGCGGCCAGCGCACCGAGGTGAGCTACCTGCTCGGCCACGCCCTGCCGATCGCCGGACGGCTGCGCCTGCCGGTGCCGCACCTGACC GAGCTGCAGCAGCGCCTGCAGGTCCGGCTCGCGGAGCGCGGATTGCCCGTCGATTAGCAGCGGGCTACCCTGCCCGCTTCCCTGTTGCCACGGCTGCGCC
DNA Sequence for Gene
>UM91_RS13580
ATGATCCTCGCCAAACGCCTGAAGAATCTCCCGGTCGGCCGCAAGTTGCTGGCTGCCCTGTTGGTGATGATGATCGCGGTGCTGGTGGTGGCCAATGTGA CCTTTATCAGCGCCGCCTACTGGATCTCCCAGGAGAGCGTGGCACCCCAGGCGCTGCAGACCCTGGGCCGGCTGTTCGCCAGCCCGGTGCTCAGCCGCGA GGTGCTGGCCTCGCCGGCGGCGGCCGAGGTGCAGCTGCGCCAGCTCGACGGCTATGCGCCGCTGCGCCTGGCCGCGGTCTACGACAGCCAGGGCCAGCGC CTGGCCGAATTGCACAATGGCGATCGCCTGCAGGTGCCGGCGCGCTTCGAAGAGCTGCAGACCTGGCGCCTGCGCGAATTCCGCACCAATCTGCTGGTGG AGCTGCCGCGTCCCGAGGGCGCTCCCGGGCATCTGCTGCTGGTGGCCAGCAGCGAACTGCCGGGGGCCTTCTACCGCGGCACCCTGACCGCCAGTCTGGC GATCCTGACCTTCAGTATCCTGCTCTGGCTGGTGGTGGCGCGGCAGATCAAGAGACTCATCACCCTGCCGATCCGCGAACTGGAAGAACTCTCGCGCCAG GTGACCCACGAGGAAAACTATTCCTTGCGCGCCAGCAAGGGCAGCGAAGACGAATTGGGCCGCCTGGCGGAATCCTTCAACACCATGCTCGGCCGCATCC AGGGCCGCGAGCAGCAACTCAAGCGCGCCCGCGACGACGCCCAGTACGCGGTGCTGCAGGCGCAGAGCCTGGCCGAGGAAACCCGCCGCTCCAACCGCAA GCTGGAGCTGGAGGTGCAGGTCCGCGGCAAGATCGAGAAGAAGCTCACCGGCTTCCAGAACTACCTCAACAGCATCATCGACTCCATGCCCTCGGCACTG ATCGCCGTGGATGAGCAGTTCTACGTCACCCAGTGGAACCAGGAGGCCACCCACCTCTCCGGCACCCAGCTGGACGAGCCCCTGACCCAGCCGGTGTTCC TGGCCTTTCCTTCGCTCAAGCCGTTCCTGCCGCAGCTGAGTCGCACCGCCGAATTGCTGCGGGTGGAAAAGGTGGAACGGGTGACCTGGGCGCTGACCGA TACCCCGCGGCACTACACCCTGACCTTCTACCCGCTGATGGGGGGCGCCGGACGCGGTGTGGTGATCCGCATCGACGACATCACCCAGCGCCTGAACATG GAAGAGATGATGGTGCAGTCGGAAAAGATGCTCTCGGTGGGCGGCCTCGCCGCCGGCATGGCCCACGAGATCAACAATCCGCTCGGCGCCATCCTGCACA ACGTGCAGAACATCCGCCGGCGGCTGTCGCCGGACTTGCCGAAGAACGTCGAGCAGGCCGCCGAATCCGGTGTCGAGCTCAATGCGGTGAACTGCTACCT AGAGAGCCGGCAGATCCCGCGGCTGCTCGACGGCATCCACCAGGCCGGCAGCCGCGCGGCCAAGATCGTCAGCCACATGCTGGCCTTCAGCCGGCGCAGC AATCGCAAGATGGAAGCCAGCGAATTGCCGCCGCTGATCGACCAGGCCATCGAGATCGCCGGCAACGACTTCGACCTGGCCGAGGGCTTCGACTTCCGCA CCCTGTCGATCATCCGCGAATTCGATCCGGCGCTGGGACCGGTGCCGGTGATCGGCAACGAACTGGAGCAGGTGCTGCTCAACCTGCTGAAGAACGCCGC CCAGGCCATCCACCTGCGCGACGACGAGGAAGAAGGCGAATACGGCCGCATCACCTTGCGCACCAAGCTGCGCGGCGGCTGGGCCGAGATCCAGGTGGAA GACAACGGCATCGGCATCCCCGAGGACATCTGCAAGCGCATCTTCGAGCCCTTCTTCACCACCAAGGAGGTGGGCCAGGGCACCGGTCTGGGCCTGTCGG TGTCGTATTTCATCATCACCAACAACCACAAGGGGCAGATGGAGGTGCACTCCACGCCTGGCGTAGGGACCTGCTTCACCCTGCGCCTGCCCCTCGTCCA GGCCGACTTCGACGCGGCCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GACCTCATCAGGAGCTGCGCCATGGGTTTTCGCCTCACCGAGATCTACACCCGCCAGGGCGACGCCGGCGACACCGGCCTGGCCGACGGCAGCCGGGTAC CCAAGGACCATCCGCGCATCGAGGCCATCGGCGCGGTGGATGAGCTCAACAGTGCCCTGGGTCTGCTGCTCGCCGAGCTGGCCGAGGATGCCCGCCTGGC CGAGGTGAGCGAGCTTCTGGCGCCCTGTCAGCACCGCCTGTTCGACCTCGGTGGCGAACTGGCCATGCCCAGCTATCGCGCCCTGCAACCGGTGGAGATC GAACGCCTGGAGGGCGCCATCGATCGCTGGAACGCCGAGCTGGGGCCGCTGGAGAACTTCATCCTGCCCGGCGGCTCGCGCGCCGTGGCCCAGGCCCATG TCTGCCGCACCCTGGCGCGCAGCGCCGAGCGCCGCTGCCGCAGCCTGCATGCGGTGGAGCCGCTGGAGGGCCAGGGCCTGCCCTATCTCAATCGCCTGTC
Amino Acid Sequence
>histidine kinase
MILAKRLKNLPVGRKLLAALLVMMIAVLVVANVTFISAAYWISQESVAPQALQTLGRLFASPVLSREVLASPAAAEVQLRQLDGYAPLRLAAVYDSQGQR LAELHNGDRLQVPARFEELQTWRLREFRTNLLVELPRPEGAPGHLLLVASSELPGAFYRGTLTASLAILTFSILLWLVVARQIKRLITLPIRELEELSRQ VTHEENYSLRASKGSEDELGRLAESFNTMLGRIQGREQQLKRARDDAQYAVLQAQSLAEETRRSNRKLELEVQVRGKIEKKLTGFQNYLNSIIDSMPSAL IAVDEQFYVTQWNQEATHLSGTQLDEPLTQPVFLAFPSLKPFLPQLSRTAELLRVEKVERVTWALTDTPRHYTLTFYPLMGGAGRGVVIRIDDITQRLNM EEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSPDLPKNVEQAAESGVELNAVNCYLESRQIPRLLDGIHQAGSRAAKIVSHMLAFSRRS NRKMEASELPPLIDQAIEIAGNDFDLAEGFDFRTLSIIREFDPALGPVPVIGNELEQVLLNLLKNAAQAIHLRDDEEEGEYGRITLRTKLRGGWAEIQVE DNGIGIPEDICKRIFEPFFTTKEVGQGTGLGLSVSYFIITNNHKGQMEVHSTPGVGTCFTLRLPLVQADFDAA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site