Pseudomonas oryzihabitans RIT370, UM91_RS13415

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas oryzihabitans strain RIT370 contig11, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGATCGCCTGGACTCGGCGCGCATCGGCAGCTCCCGCGCCATCACCCAGCTGATCCTCAACCTGGTGGAAGGCACCCCGATCAAGCTGGTCGACGGCG GCGCCCAGAAGCGTTGCTTCACCGACGTCGACGACGGCATCGAGGCGCTGTTCCGCATCATCGAGAACCAGGGCGGACGCTGCGACGGCCAGATCGTCAA CATCGGTAACCCCGACAACGAAGCGAGCATCCGCGAGCTGGCCGAAGAGCTGCTGGCCCAGTTCGAGGCCCATCCGCTGCGCCATGAATTCCCGCCCTTC GCCGGCTTCCGCGAGGTGGAGAGCAAGAGCTTCTACGGCGACGGCTACCAAGACGTGGCCCACCGCAAGCCCAGCGTGGAAAACGCCCGCCGTCTGATCG ACTGGCAGCCGACCACTGCCATGGCCGCCACCGTCGGCAAGACGCTGGACTTCTTCCTGCGCGAAGCCCTGGCGCAGCGGGAGGCCTGATGAAAGCTCTG
DNA Sequence for Gene
>UM91_RS13415
ATCCCGGCCAGCCTGCGCATCGACGTGGACACCTATCGCGGTACACGCGAAGGGGTACCGCGGCTGCTCGACCTGCTGGACGAAGCCGGGGTCAAGGCCA CCTTCTTCTTCAGCGTCGGGCCGGACAACATGGGGCGCCACCTCTGGCGCCTGGTGAAGCCCACCTTCCTGTGGAAGATGCTGAGGTCCAAGGCCGCCAG CCTCTATGGCTGGGACATCCTGCTGGCCGGCACCGCCTGGCCGGGTCGGCCCATCGGTCGCGACCTCGGTCACCTGATGCGCGAGACCCGCGCGCGCGGC CACGAGGTCGGTCTGCACGCCTGGGATCACCACGCCTGGCAGGCCCACACCGGCAGCTGGAGCCTGGAGCGCCTGGGCGAGGAATTCGGCCGCGGCCTGC AGGCCCTGGAAGACATCCTCGGCGCCAAGGTCGACTGCTCCGCCGCCGCCGGCTGGCGCGCCGATCCGCGGGTGGTGCTGGCCAAGGAAGCCTTCGGCCT CCGCTACAACAGCGATTGCCGCGGCAGAACCCTCTTCGTTCCTCGGTTGGAAAGTGGAGCGTTGGGCACTCCGCAGATCCCGGTAGACATGCCTACCTTC GATGAGGTGGTCGGCCCCGACCTTCCTGCCGCCGACTGGAACGGCTATCTGCTCAAGCGCTTCCGTCCAGGGGCGCTCAACGTCTACACCCTGCATGCCG AGGTGGAAGGCATCGCCTTCGCCGAGGACTTCCGCGCATTGCTCAAGGCGGCGCGCGAGCAGGAAATCCATTTCGTACCCATGGGCGATCGTCTGCCCGA GGATCCACACAGGCTTCCAGAGGGGAAGGTTGTCCGCGGCAGTCTTGCGGGACGCCAGGGATGGTTAGGAGTACAACAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCGAGTGCGTCTGCTGTTCTTACTGCCCGTGGCGCTACTAGCGTACGTGCTTCCCTTGAACTGGCGCGGTCTCTGGATTCCAGATGAATCGCGCTACGC CCAAATCGGGCAAGAGCTGTGGCGAAGCGGCGATTGGGTAGTACCCCACTTCCTGGGTCTGCCCTATTTCGAGAAACCCATCGGTGGATATTGGACGCAG GCGATAGCTCAAGCCTTGCTGGGCGACTCGCTGCTCAGCGTACGCCTTGTACCCTTGTTGGCCGGCTTCGCCACAGCAGCTTTGGTCGTCCGCCTGACGC GCCTGATCTGGGGTGATCGGCAGCTGGCGCTACTCGCCGGTGTGCTCTACCTGTCGTGCCTCGCCATAGCGGCATCGGCCACCTATGTGACTCTGGACGC CCAGTTCGCCTTCTGGACGACGCTTTCGCTGCTAGCCCTTTGGCAGGCCCAAGCCGCTACCACCCTTGGCGTGGCCCTGCGCAATTGGGCGTTGCTCGGC
Amino Acid Sequence
>4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase
MPASLRIDVDTYRGTREGVPRLLDLLDEAGVKATFFFSVGPDNMGRHLWRLVKPTFLWKMLRSKAASLYGWDILLAGTAWPGRPIGRDLGHLMRETRARG HEVGLHAWDHHAWQAHTGSWSLERLGEEFGRGLQALEDILGAKVDCSAAAGWRADPRVVLAKEAFGLRYNSDCRGRTLFVPRLESGALGTPQIPVDMPTF DEVVGPDLPAADWNGYLLKRFRPGALNVYTLHAEVEGIAFAEDFRALLKAAREQEIHFVPMGDRLPEDPHRLPEGKVVRGSLAGRQGWLGVQQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site