Pseudomonas oryzihabitans RIT370, UM91_RS13320

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas oryzihabitans strain RIT370 contig11, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGCGGCGCGATCTCGTCCCACAATTCCGCCCAGACCTCATCGATCGGCTGCCCCAGGGCGGCCGGATGGCGGGCGCCGAGAAAGGGGGCGTAGGCCTGG TTGTAGATCAGCGTCTGCTCGGCGCCCCAGGTGGCGCACATGGCGAAGGGAGACGCCATCAGCAGGTCGTAGGTGGTCCGAAGGGCCACGGGCCAGCTGG CGCGCGCGCCCAGTGGCGTGGTTTCCCAGGCGAAACTTTCGAGATAGGACAAGGGACGACTCACTGGCAGAGGCGCGGAGGGATCTCGTGGCCGTCCGGG CCTGCCGCGAGGCGCCCGGATGCCCATGATAGGCAGGTACGCAAGGCCCCTGCCAGTACCGTGATCCATCGCTGGCACCGCCCTGCCCACCCGAGGCGGG ACCGGGCCTGCGGCATGCTGTCCCGGTGAAACGACTGGCACCGGCGCCGTGCATCTCTTACCGTGTGGCCCCCGCTGTCGCTGTCAGGTATCCGCTCGTC
DNA Sequence for Gene
>UM91_RS13320
ATGTCCGCGTCTCCCACCCCGCCCGAGGGGCTGCAACGCAGCCTGTCCAATCGCCATCTGCAACTGATCGCCATCGGCGGCGCCATAGGCACCGGCCTGT TCATGGGCTCGGGCAAGACCATCGCCCTGGCCGGCCCCTCGATCCTGCTGGTCTACCTGATCATCGGCAGCGCCCTGTTCTTCGTCATGCGCGCCCTGGG CGAATTGCTGCTGTCGGATCTGGAGTACAAGTCCTTCATCGACTTCTGCACCGATTTGCTCGGGCCCTGGGCCGGCTTCTTCTGTGGCTGGACCTACTGG TTCTGCTGGATCGTCACTGCCATCGCCGATGTCATCGCCATCGCCGCCTATGCCCAGTTCTGGTTTCCCAGCCTCGCGCCCTGGATCCCGGCGCTGCTCT GCGTGCTGCTCCTGCTGGGTCTGAATCTGGTCACGGTGCGGCTGTTCGGCGAACTGGAATTCTGGTTCGCGCTGATCAAGATCGTCGCCATCTGCGCCCT GATCGTCACCGGCTTCGGCCTGGTGCTCTGGGGCTTCCAGTCGCCCTCGGGCAACGTCGCCAGCCTCGCCAATCTGTGGAACGACGGCGGCGTCTTTCCC ATGGGGCTGGGCGGTTTCTTCGCCGGTTTCCAGATCGCCGTCTTCGCCTTCGTCGGTATCGAGCTGGTGGGCACCACCGCCGCCGAGACCGCCGATCCGC GGCGCAACCTGCCGCGGGCGATCAACTCCATTCCGGTGCGCATCCTGGTGTTCTATGTGCTGGCGCTGGTGGTGATCATGGCGGTGACGCCCTGGCGCCA GGTGGTGCCGGACAAGAGTCCCTTCGTCGAACTCTTCGTGCTGGCCGGCGTGCCCATGGCCGCCAGCCTGATCAATTTCGTGGTGCTGACCTCCGCCACC TCCTCGGCCAACAGCGGCATCTTCTCCACCAGCCGGATGCTCTATGGCCTGGCCCGGGAAGGCCATGCGCCACGCGGCCTCACCCGCCTCTCGCGGGCGG CGGTGCCGGCGCGCGGCCTGGTGCTGTCCTGCCTGTGCCTGCTGCTGGGTACGGTGCTGATCTACCTGATCCCCAACCTGGTCACCGCCTTCACTCTGGT CACCACCCTGGCCGCGGTGCTGTTCATGTTCGTCTGGTCGCTGATCCTGCTGGCCTGGCTGGCCTACCGCCGCAACCGTCCGGAGCGCCATGCCGCCTCG GCCTTCCGCCTGCCCGGCGGGCGCTGGGTGTGCTACGGGGTGCTGGCCTTCTTTGCCGCGGTGCTGGTGCTGCTGACCCTGCAGGACGACACCCGCCAGG CGCTGCTGGCCAGTCCGCTGTGGTTCCTGCTGCTGGGGGTGGGCTACTGGTGGCGCGGGCGGCGGGTGGTACGCGCCGGCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGGACGCTGACCGCTCAGCCCAGCGTCCAGAGTTCATCGAGCCGGGTGGTGTAGCGCGGGCTGAGCAGGTCGCGGCGCATCTGCCAGGCGGGATCGCGC GGGATCCGCGCCGGTCTCAGGGTCTCGCGACCGAACCGGCCGTTGATGGCGTCCAGGGTCGCCATCAGCCGGGCCGCGGCCGGATCCGGGGCGGCGGCGA AGAGATCCGCCGCCACCTCGCTACGGCCGCAGAGATCGAGCAGCAGCACCTCGGCCTTGGCGTAGCCGAAGCCGTCGCGAAAGATCTCGCGCAGGCCCGC CTGGGCCTGGTCGTTGAGCACCCGGGTGTCGTCGCTGGGCACCGGCAGGTTGAGCAGGGCGGCATTGGCGTAGCGGCCTTCGTCGGCGCCGTGCATGCCG GTCTGGATACTGACCCTCAGGGTGCGACAGAGCGAGCCCTGGGCGCGCAGCTTTTCCGCAGCCCGCGCGGTGTAGCTGGCCACCGCCTCGGCCAGGGCGC
Amino Acid Sequence
>amino acid permease
MSASPTPPEGLQRSLSNRHLQLIAIGGAIGTGLFMGSGKTIALAGPSILLVYLIIGSALFFVMRALGELLLSDLEYKSFIDFCTDLLGPWAGFFCGWTYW FCWIVTAIADVIAIAAYAQFWFPSLAPWIPALLCVLLLLGLNLVTVRLFGELEFWFALIKIVAICALIVTGFGLVLWGFQSPSGNVASLANLWNDGGVFP MGLGGFFAGFQIAVFAFVGIELVGTTAAETADPRRNLPRAINSIPVRILVFYVLALVVIMAVTPWRQVVPDKSPFVELFVLAGVPMAASLINFVVLTSAT SSANSGIFSTSRMLYGLAREGHAPRGLTRLSRAAVPARGLVLSCLCLLLGTVLIYLIPNLVTAFTLVTTLAAVLFMFVWSLILLAWLAYRRNRPERHAAS AFRLPGGRWVCYGVLAFFAAVLVLLTLQDDTRQALLASPLWFLLLGVGYWWRGRRVVRAG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site