Pseudomonas oryzihabitans RIT370, UM91_RS13200 (glnQ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas oryzihabitans strain RIT370 contig11, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATCCCGCTGATCACGGTGCTCTTCCTGTCGTCGGTGATGCTGCCGCTGTTCCTGCCCGAGGGCATGAACCTCGACAAGCTGCTGCGCGCCATCGTCATG GTGATCATCTTCGAGGCGGCCTACATCGCCGAAGTGGTCCGCGGTGGCATGCAGGCCATTCCCAAGGGCCAGTACGAGGCCGCTGCCGCCATGGGCCTGG GCTACTGGCGAACCATGGGCCTGGTGATCCTGCCGCAGGCGCTCAAGCTGGTGATCCCGGGCATCGTCAACACCTTCATCGCGCTGTTCAAGGATTCGAG CCTGGTGATCATCATCGGCCTGTTCGACCTGCTCAACAGCATCAAGCGCGCCACCTCGGATCCGGCCTGGCTGGGCATGTCCACCGAGGGCTATGTGTTC GCCGCGCTGATCTACTGGGTTTTCTGTTTCGCCATGTCCAGCTACTCCGCTCGCCTGGAGCGCAAGCTGAACACCGGCCACAAGCGTTAGGAGTCATCAG
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| DNA Sequence for Gene |
>UM91_RS13200
|glnQ
ATGAACGTAAGCAACAAGCAGCAGGTCGACAGCAGCAAGGTCATGATCCAGCTCAAGGACGTGAACAAGTGGTACGGCCAGTTCCACGTGCTCAAGGACA TCAACCTGACCGTGACCCAGGGCGAGCGCATCGTGCTGTGCGGGCCGTCCGGCTCGGGCAAGTCCACCACCATCCGTTGCATCAACCGGCTGGAAGAACA CCAGAAGGGCCAGATCATCGTCGATGGCACCGAGCTGACCAACGATCTCAAGCAGATCGAGACCATTCGCAGCGAAGTGGGCATGGTGTTCCAGCACTTC AACCTCTTCCCGCACCTGACCGTGCTGCAGAACTGCACCCTGGCCCCCATGTGGGTGCGCAAGATGCCGAAGAAGCAGGCCGAAGAAATCGCCATGCACT ACCTGCAGCGGGTGCGCATTCCCGAGCAGGCCAACAAATTTCCGGGCCAGCTGTCCGGCGGCCAGCAGCAGCGCGTGGCCATCGCCCGGGCGCTGTGCAT GCAGCCGCGCATCATGCTGTTCGATGAGCCGACCTCGGCGCTCGACCCTGAGATGGTGAAGGAGGTGCTGGACACCATGATCGGTCTGGCCCAGGACGGT ATGACCATGCTCTGCGTGACCCACGAGATGGGCTTCGCCCGCACCGTGGCCAACCGGGTGATCTTCATGGACAAGGGCGAAATCGTCGAACAGGCCGCTC CGGACCAGTTCTTCGACAACCCGCAGAACGAGCGTACCCGCCTGTTCCTCGGGCAGATCCTGCACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCGGCCGGGGCGGCGACCTGTCCGCCCCGGTCGTCCTGCGAACCCAGTCACGGGCGTTCGGCGGGAAGGCGGGCAAAGGGCCGCAAGGCGCGGTATCC TCGACGTTTGGCGCCCGGTTTCCGGGGTCGGCGGTCAAGGTCCGCCTTGCCGTTCACCGGCTTCATTGTCGATTTCGTAGCGTATCGCCAGAACGGGCGG TGCGCTGGGCAGTCGAAGCCGTCATCATAGAGAGACGCCCGTGAACTCCATTTCCCATCCGCTCATGCTGACAAAAGCCAAGGCCTGGGGCGCCCATGCG GTGACCTCCAGTGGTGTGATCCTCGCGCTTCTGGCGCTGCTCGCTCTGGTCGACGGTCAACCCAAGGGTTGCCTGATGTGGCTGGGCATCGCCCTGCTCG GCGACGGTCTGGACGGCACCCTGGCGCGCAAGTTCGAAGTCAAGCGGGTATTGCCCCATTTCGACGGCTCGGCGCTGGACCTGGTGGTCGACTACCTGAC
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| Amino Acid Sequence |
>glutamine ABC transporter ATP-binding protein
MNVSNKQQVDSSKVMIQLKDVNKWYGQFHVLKDINLTVTQGERIVLCGPSGSGKSTTIRCINRLEEHQKGQIIVDGTELTNDLKQIETIRSEVGMVFQHF NLFPHLTVLQNCTLAPMWVRKMPKKQAEEIAMHYLQRVRIPEQANKFPGQLSGGQQQRVAIARALCMQPRIMLFDEPTSALDPEMVKEVLDTMIGLAQDG MTMLCVTHEMGFARTVANRVIFMDKGEIVEQAAPDQFFDNPQNERTRLFLGQILH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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