Pseudomonas oryzihabitans RIT370, UM91_RS02150

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas oryzihabitans strain RIT370 contig1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTGATTTAGATGGATGCTGGAGACTGGCACGGGCCTTGCTAAATCGCTTGCAAGCCACGTCAAAGGTCTCTCGACATGAGCATCAGTTTCGACAAAGCAC TCGGGTTGCACGAGCAGGCGCTGAACTTCCGTTCGCAGCGTGCCGAGGTGTTGGGCAACAACATCGCCAATGCCGACACCCCAGGCTACAAGGCACGGGA TCTGGATTTCAGCGCCGTGATGGCAGAGCAGGCGGCCAAGAGCGCGCCGGGGGCTTCCGGTCACTATCAGCTGGAAACCACCAACAGCCGCCATATCGCT GCCGAAGGCTTCGACATGGGCATGGGTGACTCGGCGTTGAAATATCGCATCCCCACTCAGCCCTCGGTGGACCAGAACACCGTGGATGCGCAGGTCGAGC AGGCCAACTACGCGGAGAACGCGATGAATTTCCAGGCCAGTTTCACCCTGCTCAATAGCAAGTTCAAGGGGCTGATGTCGGCCCTGCGCGGAGAATAGCC
DNA Sequence for Gene
>UM91_RS02150
ATGTCCCTGAGTTCGCTGTTCAACATCGCCGGCAGCGGGATGAGCGCCCAGAACGTTCGCCTCAATACCGTGGCCAGCAACATGGCCAACGCCGATTCCG TGTCTTCCAGCGTCGACCAGACCTACAAGGCGCGGCACCCGGTGTTCGCCGCCCAGCTCAACGAGGCCCAGGGCGGCGCGTCGCTGTTCGACGACCAGGG CCAGGCCGGGGTTGGGGTGGAGGTCAAGGGCATCGTCGAGGACCAGAGCGAGGTGCAGAAGCGCTATGAGCCCAACCACCCGATGGCGGACAAGGACGGC TATGTCTACTACCCCAACGTGAACGTGGTGGAGGAGATGGCCGACATGATTTCGGCCAGTCGCGCCTTCCAGACCAATGCGGAAATGATGAATACCGCCA AACAGATGATGCAGAAGGTACTGACCCTCGGTCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAATCGGCGCCATGTCCATAAGCACGACCAATTCAACCGCTCAGTCGGTGCTCGACAAGTATTCCGTCAACAAGACAGACGCTACCTCCGAGACCGCCA GCAGCGATGGCAAGAAAGGCGGCAAGCTCGGCAAGGATGAGTTCCTCAAGCTGATGGTCGCCCAGATGAACAACCAGAATCCGCTGGAGCCCCAGGGCAA CGGCGAATTCATCGCACAGCTGGCGCAGTTCAGTACCGTCGAGGGCATCACCAACCTCAATACCAGCGTCAGCTCGATCCTCTCCGGCAGTCAGTCTTCC CAGGCGCTGCAGGCGTCCACCCTGGTGGGCCGCAAGGTGATCGTCGATACCGACAAGGTCAAGGTGGATACCAGTGCGGACTTCAAGGGTGCGCTCAATC TGACCGCGTCCAGTCCGAACGTCTGGGTCAACGTCTACAACGACGCCGGCAGTCAGGTGAATCGTCTGAACCTGGGGCAGCAATCCAGTGGCCTGGTGAA
Amino Acid Sequence
>flagellar basal body rod protein FlgC
MSLSSLFNIAGSGMSAQNVRLNTVASNMANADSVSSSVDQTYKARHPVFAAQLNEAQGGASLFDDQGQAGVGVEVKGIVEDQSEVQKRYEPNHPMADKDG YVYYPNVNVVEEMADMISASRAFQTNAEMMNTAKQMMQKVLTLGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site