Pseudomonas oryzihabitans RIT370, UM91_RS01840

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas oryzihabitans strain RIT370 contig1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGTCAGCCACCAGCCCTGGACCACCGAAGACCTGGCTCGCTTCACCCGTCTGGTGCAGGATGCCGTGGGCTTCGACGCCAGCCGTGGCGACAGCGTGAGC GTGATCAATGCGCCCTTCGCCCCGGTGCAGCAGGAAGAGATCGAGAGCATTCCCTTCTACCAGCAGCCCTGGTTCTGGGGTGTGGTCAAGCAGGCCCTCG GCGTCCTCTTCATCCTGGTGCTAGTCTTTGGGGTGCTGCGTCCGGTGCTGAAGAACCTGTCCGGCGGCAACACCAAGGACGCCGCTGCCCTGGCCGCTGC CGGTGGTGCCGGTGCCCTGGGTGCCGGTGGTCTGGATGGACTGTCGGACGATCTGGCCGACGACAAGGTGAGCCTGGCCGGTCCTGCGCCGCTGTTGCTG CCCAGCCCCAGCGAGGGTTATGACGCTCAACTGACCGCCATCAAGCAGCTGGTCAACGATGATCCGGGCCGTGTCGCCCAGGTAGTGAAGGATTGGATCA
DNA Sequence for Gene
>UM91_RS01840
ATGGCGACGAATGACGCGCAACTTTCCAAGGTCGAGAAGGCCGCGATCTTCCTCCTGTCGCTGGGTGAGGCCGATGCCGCGCAGATCCTGCGCCACATGG GGCCCAAGGAGGTACAGAAGGTCGGTACCGCCATGGCGCAGATGCGCAACGTCAACCGCGAGCAGGTCGAGCGGGTACTGGGCGACTTCATCGAGGTGGT GGGCGACCAGACCAGCCTGGGCGTGGGCGCCGACGGCTACATCCGCAAGATGCTCACCCAGGCCCTGGGCGAGGACAAGGCCAGCGGCCTGATCGACCGC ATCCTGCTGGGCGGCAACACCAGCGGCCTGGACAGCCTGAAGTGGATGGAGCCGCGGGCGGTGGCGGACGTGATCCGCTACGAACACCCGCAGATCCAGG CCATCGTGGTGGCCTATCTGGACCCGGACCAGGCGGCCGAGGTGCTCGGTCACTTCGATCACAAGGTGCGCCTGGACATCGTCCTGCGCGTTTCCTCGCT GAACACCGTGCAACCGGCGGCGCTCAAGGAGCTGAACCTGATCCTGGAGAAGCAGTTCTCCGGCAGCGCCAGCACCACCCGTACCGCCCTGGGCGGCGTG AAGCGCGCCGCCGACATCATGAACTACCTGGACAGCTCGGTCGAAGGCCCGCTGATGGATGCGATCCGCGACGCGGACCAGGATCTGTCGGGGCAGATCG AGGACCTGATGTTCGTCTTCGACAACCTGGCCGACGTCGACGACCGCGGCATCCAGGCGCTCCTGCGCGAGGTGTCTTCCGATGTGCTGGTGCTGGCGCT CAAGGGCGCCGACGACGGCATCAAGGAGAAGTTCTTCCGCAACATGTCCAAGCGCGCGGCCGAGCTGCTGCGCGACGACCTGGAAGCCAAGGGCCCGGTG CGACTGTCCGAGGTGGAGGGCGCGCAGAAGGAGGTCCTCGCCGTCGCTCGTCGCATGGCCGATGCCGGCGAGATCGTTCTGGGCGGCAAGGGTGGCGAGG AAATGGTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGGCTTGCCGGGGTTGGCCTGTGCTTTGCTAATGTCTGGTCAGTAGCGGTTTTCTGACGGACAGGTAATGAGCAAAGAAGCGGCGAGCGAACTGATCAGG GCGCGGGATCTGGAAGCCTTCGATGTCTGGCGACTGCCGGCCTTCGACAGTTTCGACGAGCCCGAGGAGATCCCTGCGCCCGCGGCGGCAGAGCCCGAGC CCCAGCCGGAGCCGCAGATCGAAGAGGTGCCGGTCGAAGAGGTCCAGCCGATCACCCTCGAAGAGCTGGAGGCGATCCGCCAGGAGGCCTACAACGAAGG CTTCGTCACCGGCGAGCGCGACGGCTACCACGCCGGTCAGCTCAAGGCGCGCCAGGAAGCCGAGGCGGCGCTGACCGCCCGGCTGGCCAGCCTGGAAACC CTGATGAGCCATCTGCTCGATCCCATCGGCGAACAGGACCAGGCCCTGGAAGCCGGGATGGTGCAGCTGGTCCGGCACATCACCCGCGAAGTCATCCAGC
Amino Acid Sequence
>flagellar motor switch protein FliG
MATNDAQLSKVEKAAIFLLSLGEADAAQILRHMGPKEVQKVGTAMAQMRNVNREQVERVLGDFIEVVGDQTSLGVGADGYIRKMLTQALGEDKASGLIDR ILLGGNTSGLDSLKWMEPRAVADVIRYEHPQIQAIVVAYLDPDQAAEVLGHFDHKVRLDIVLRVSSLNTVQPAALKELNLILEKQFSGSASTTRTALGGV KRAADIMNYLDSSVEGPLMDAIRDADQDLSGQIEDLMFVFDNLADVDDRGIQALLREVSSDVLVLALKGADDGIKEKFFRNMSKRAAELLRDDLEAKGPV RLSEVEGAQKEVLAVARRMADAGEIVLGGKGGEEMV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site