Pseudomonas oryzihabitans RIT370, UM91_RS01780

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas oryzihabitans strain RIT370 contig1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCCTTCCAGATCGGCTTCATGATCTTCATTCCCTTCCTGGTCATCGACCTGGTGATCGCCAGCGTGCTGATGGCCATGGGCATGATGATGCTGTCGCCG ATGATCATCTCCCTGCCGTTCAAGCTGATGCTGTTCGTGCTGGTGGATGGCTGGGCGCTGATCATGGGTACCCTGGCCAGCAGCTTCGGCACCGTCTAGC GGTGCCCCCTTTGCGTGGAGAAGCGAAATGACCCCTGAAGTCGCCGTCGATCTGTTCCGCCAGGGTCTCTGGCTTACCGCGCTGCTGGTGGCGGTGCTGG TGGTGCCGAGTCTGATCGTCGGTCTGATCGTGGCGGTCTTCCAGGCGGCGACCCAGATCAACGAACAGACCCTGAGCTTTCTGCCGCGGCTGATCGTCAC CCTGTTGACGCTGATCGTGCTGGGACCCTGGATGGTCCGGCAACTGATGGAATTCATCCAGACCTCGGTCGCCAACATCCCGCGGCTGATTGGCTAGCCC
DNA Sequence for Gene
>UM91_RS01780
ATGCTCGCCCTCAGCGACGCCCAGATCGGCGGCTGGGTCGGCAGCTTCCTGTTTCCGCTGTTCCGCATCGCCGCGCTGCTGATGACCATGCCGATCATCG GCACCACCCTGGTCCCGGTGCGGGTGCGGATGTATTTGGCCCTGGCCCTGAGCCTGGTGCTGGTGCCGACCCTGCCGCCGATGCCACAGGTGGATGCCAT CAGTCCCCAGGCGCTGCCGCTGATCGTCGAGCAGATCCTCATCGGCGCGGTGATGGGGTTCAGCCTGCAGCTGTTCTTCCATGTCTTCGTGGTGGCGGGC CAGATCATCTCGACCCAAGCGGGCCTGAGCTTTGCGTCCATGATCGACCCGGTCAACGGCGCCTCGGCCCCGGTCATGGGCCAGTTCTTCACCATGCTGG TGACGCTGCTGTTCCTGGCCATGAACGGCCATCTGGTGGTGTTCGAGATCCTCGCCGAAAGCTTCGTTACCCTGCCGGTGGGCGATACCCTGAGCGTCGA GCACTTCTGGCAGGTCGCCGGGCGGCTGGGCTGGGTCATGGGCGCCGGCATCCTGCTGGTGCTGCCGGCCATCACCGCGCTGCTGGTGGTCAACATCGCC TTTGGCATCATGACCCGCGCCGCGCCGCAGCTGAACATCTTTTCCGTCGGCATGCCGCTGATCGTGGTGCTGGGCATGGTCATCGTCTGGCTCGGCACCG CCGACATCCTCTCCCACTATGAAAGTCTCGCCAGCGAGGCGCTGCAATGGCTGCGCGAACTCGCCCGAGCCCGCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAGATATGCCGCATGGCTGAATCCGATGGCGAAGACCGTACAGAAGACCCCACAGAGAAACGCAAGCGTGACTCCCGGGAGGAGGGGCAGCTCCCGCGAT CACGCGAACTCGGCACGGTGGCGGTCATGCTCTCGGGGGTCGGCGGCCTGCTGATGTACGGCGCCTTCCTGGGCGGCAAGCTGCTGGAGGTGATGCGCAG CAACTTCTCCCTGCGGCGCGAAGAGGTCATGGACGAACGCTTCATGGGCACCTTCCTGCTGGCCTCGGGCAAGGCGGCGATGATCGGGATGCTGCCGATG ATCGCCTTGGTGGTGATCGCCGCCATCGTTGGCCACATCGCCCTGGGTGGCTTCCTCTTTTCCGGCAAGATGCTGGCGCCCAAGCCGAGCCGGATGAATC CCATGTCCGGCATCGCCCGGATGTTTTCCAAGAATTCCCTGGTGGAATTGCTCAAGGCCCTGGGCAAGTTCTTCATCATCCTCGGCGTGTCGGTGCTGGT
Amino Acid Sequence
>flagellar biosynthesis protein FliR
MLALSDAQIGGWVGSFLFPLFRIAALLMTMPIIGTTLVPVRVRMYLALALSLVLVPTLPPMPQVDAISPQALPLIVEQILIGAVMGFSLQLFFHVFVVAG QIISTQAGLSFASMIDPVNGASAPVMGQFFTMLVTLLFLAMNGHLVVFEILAESFVTLPVGDTLSVEHFWQVAGRLGWVMGAGILLVLPAITALLVVNIA FGIMTRAAPQLNIFSVGMPLIVVLGMVIVWLGTADILSHYESLASEALQWLRELARAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site